Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
A05p12910 A05 - View
C04p16930 C04 - View
A03p18260 A03 + View
C03p21310 C03 + View
A04p25240 A04 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G4350 LG-5 + View
Arabidopsis lyrata AL4G28140 scaffold_4 + View
Arabidopsis thaliana AT2G32700 LEUNIG-like protein Encodes a WD40 repeat and LUFS domain containing protein that is similar to LUG. Interacts physically with SEUSS and likely functions as part of a repressor complex that represses AG. Involved in cell wall modifications necessary for mucilage extrusion. LEUNIG_homolog (LUH)%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C LisH dimerisation motif%2C subgroup (InterPro:IPR013720)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C WD40 repeat (InterPro:IPR001680)%2C G-protein beta WD-40 repeat%2C region (InterPro:IPR020472)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C LisH dimerisation motif (InterPro:IPR006594)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: LisH dimerisation motif%3BWD40/YVTN repeat-like-containing domain (TAIR:AT4G32551.1)%3B Has 67720 Blast hits to 31790 proteins in 821 species: Archae - 72%3B Bacteria - 8702%3B Metazoa - 26412%3B Fungi - 15362%3B Plants - 8347%3B Viruses - 0%3B Other Eukaryotes - 8825 (source: NCBI BLink). LEUNIG_homolog (LUH)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: flower development%2C negative regulation of transcription%2C embryo development%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C LisH dimerisation motif%2C subgroup (InterPro:IPR013720)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C WD40 repeat (InterPro:IPR001680)%2C G-protein beta WD-40 repeat%2C region (InterPro:IPR020472)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C LisH dimerisation motif (InterPro:IPR006594)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: LisH dimerisation motif%3BWD40/YVTN repeat-like-containing domain (TAIR:AT4G32551.1)%3B Has 67484 Blast hits to 31766 proteins in 819 species: Archae - 68%3B Bacteria - 8700%3B Metazoa - 26198%3B Fungi - 15367%3B Plants - 8354%3B Viruses - 0%3B Other Eukaryotes - 8797 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaB06g28627 ChrB06 + View
Brassica carinata BcaC02g11353 ChrC02 + View
Brassica carinata BcaB01g03965 ChrB01 - View
Brassica carinata BcaC02g07892 ChrC02 - View
Brassica carinata BcaC01g05896 ChrC01 - View
Brassica carinata BcaB02g10491 ChrB02 + View
Brassica oleracea BolC4t27703H C4 + View
Brassica oleracea BolC3t14513H C3 + View
Brassica oleracea BolC4t23252H C4 - View
Brassica rapa BraA05t20231Z A05 - View
Brassica rapa BraA03t11086Z A03 + View
Brassica rapa BraA04t18027Z A04 + View
Cannabis sativa CANSAT78G1202 NC_044376.1 - View
Cardamine hirsuta CARHR126590 WD-40 repeat family protein Chr4 + View
Capsella rubella Carub.0004s1406 PTHR22847//PTHR22847:SF502 - WD40 REPEAT PROTEIN // WD40 REPEAT PROTEIN MUCILAGE-MODIFIED 1 scaffold_4 + View
Cucumis sativus L. CsaV3_3G011040 Transcriptional corepressor LEUNIG chr3 - View
Durio zibethinus Duzib268G1331 NW_019168270.1 - View
Eucalyptus grandis Eucgr.H00067 Chr08 - View
Eutrema salsugineum Thhalv10016303m.g PTHR22847:SF502 - WD40 REPEAT PROTEIN MUCILAGE-MODIFIED 1 scaffold_10 + View
Fragaria x ananassa FAN27G2627 PTHR22847//PTHR22847:SF473 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Fvb2-1 - View
Malus domestica MD04G1005500 LEUNIG homolog Chr04 + View
Sechium edule Sed0000820 LG12 + View
Schrenkiella parvula Sp4g15040 PTHR22847:SF502 - WD40 REPEAT PROTEIN MUCILAGE-MODIFIED 1 ch4-6 + View
Trochodendron aralioides TAR365G0060 group16 - View
Tarenaya hassleriana THA.LOC104801044 transcriptional corepressor LEUNIG_HOMOLOG isoform X1 NW_010969548.1 + View