Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaB03g14751 ChrB03 + View
BcaC08g45867 ChrC08 - View
BcaB03g15500 ChrB03 + View
BcaC03g15113 ChrC03 + View
BcaC05g25325 ChrC05 + View
BcaC08g46422 ChrC08 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G11050 LG-4 - View
Arabidopsis lyrata AL1G38660 scaffold_1 - View
Arabidopsis lyrata AL2G28920 scaffold_2 + View
Arabidopsis thaliana AT1G26910 Ribosomal protein L16p/L10e family protein Ribosomal protein L16p/L10e family protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: response to UV-B%2C developmental process%2C translation%3B LOCATED IN: ribosome%2C membrane%2C chloroplast envelope%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L10e (InterPro:IPR001197)%2C Ribosomal protein L10e/L16 (InterPro:IPR016180)%2C Ribosomal protein L10e%2C conserved site (InterPro:IPR018255)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein L16p/L10e family protein (TAIR:AT1G14320.1)%3B Has 1680 Blast hits to 1678 proteins in 606 species: Archae - 325%3B Bacteria - 13%3B Metazoa - 563%3B Fungi - 162%3B Plants - 159%3B Viruses - 0%3B Other Eukaryotes - 458 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT1G14320 Ribosomal protein L16p/L10e family protein Encodes a ribosomal protein L10 and may be involved in translation regulation. Semi-dominant mutations in SAC552 can suppress defects in acaulis5%2C which encodes a thermospermine synthase%2C by enhancing translation of acl5 and itself. SUPPRESSOR OF ACAULIS 52 (SAC52)%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: cellular response to UV-B%2C translation%3B LOCATED IN: in 7 components%3B EXPRESSED IN: 27 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L10e (InterPro:IPR001197)%2C Ribosomal protein L10e/L16 (InterPro:IPR016180)%2C Ribosomal protein L10e%2C conserved site (InterPro:IPR018255)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein L16p/L10e family protein (TAIR:AT1G26910.1)%3B Has 1679 Blast hits to 1677 proteins in 606 species: Archae - 325%3B Bacteria - 13%3B Metazoa - 562%3B Fungi - 162%3B Plants - 159%3B Viruses - 0%3B Other Eukaryotes - 458 (source: NCBI BLink). Chr1 + View
Brassica napus A07p36150 A07 + View
Brassica napus C08p22700 C08 - View
Brassica napus A07p31400 A07 - View
Brassica napus C06p36650 C06 - View
Brassica napus C02p26740 C02 + View
Brassica napus C06p43540 C06 + View
Brassica napus A02p16090 A02 + View
Brassica oleracea BolC2t08747H C2 + View
Brassica oleracea BolC6t38774H C6 - View
Brassica oleracea BolC6t39427H C6 + View
Brassica rapa BraA06t24212Z A06 + View
Brassica rapa BraA07t31191Z A07 + View
Brassica rapa BraA02t06669Z A02 + View
Brassica rapa BraA07t30775Z A07 - View
Cardamine hirsuta CARHR062810 60S ribosomal protein L10 Chr2 + View
Cardamine hirsuta CARHR025030 60S ribosomal protein L10 Chr1 - View
Capsella rubella Carub.0002s1642 K02866 - large subunit ribosomal protein L10e (RP-L10e, RPL10) scaffold_2 + View
Eutrema salsugineum Thhalv10008763m.g K02866 - large subunit ribosomal protein L10e (RP-L10e, RPL10) scaffold_5 + View
Eutrema salsugineum Thhalv10019112m.g K02866 - large subunit ribosomal protein L10e (RP-L10e, RPL10) scaffold_9 - View
Schrenkiella parvula Sp5g24860 K02866 - large subunit ribosomal protein L10e (RP-L10e, RPL10) ch5-6 + View
Schrenkiella parvula Sp1g21870 K02866 - large subunit ribosomal protein L10e (RP-L10e, RPL10) ch1-1 - View
Tarenaya hassleriana THA.LOC104822190 60S ribosomal protein L10-2-like NW_010966617.1 - View
Tarenaya hassleriana THA.LOC104822920 60S ribosomal protein L10-1-like NW_010966822.1 + View