Gene: AT1G14320

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G14320
  • Transcript Identifier AT1G14320.1
  • Gene Type Coding gene
  • Location Chr1 : 4888270-4889408 : positive

Gene Family Information

  • ID HOM05D001838
  • #Genes/#Species 356/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G14320.1
  • symbol SAC52
  • Alias RPL10A,ribosomal protein L10 A,RPL10,ribosomal protein L10
  • full_name SUPPRESSOR OF ACAULIS 52
  • uniprot Q93VT9

Descriptions

  • Description Ribosomal protein L16p/L10e family protein
  • Computational description SUPPRESSOR OF ACAULIS 52 (SAC52); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: cellular response to UV-B, translation; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L10e (InterPro:IPR001197), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L10e, conserved site (InterPro:IPR018255); BEST Arabidopsis thaliana protein match is: Ribosomal protein L16p/L10e family protein (TAIR:AT1G26910.1); Has 1679 Blast hits to 1677 proteins in 606 species: Archae - 325; Bacteria - 13; Metazoa - 562; Fungi - 162; Plants - 159; Viruses - 0; Other Eukaryotes - 458 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010939
IMP, IGI
GOA Databaseregulation of necrotic cell death
GO:0051607
IMP
GOA Databasedefense response to virus
GO:0006952
IEA
GOA Databasedefense response
GO:0006412
IEA
GOA Databasetranslation
GO:0006412
TAS
Gene Ontologytranslation1
GO:0006412
IEA
InterProtranslation
GO:0071493
IMP
Gene Ontologycellular response to UV-B2
GO:0032502
IMP
Gene Ontologydevelopmental process3
GO:0000027
IBA
Gene Ontologyribosomal large subunit assembly4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IDA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IBA
Gene Ontologystructural constituent of ribosome4
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0005515
IPI
Gene Ontologyprotein binding5
GO:0003729
IDA, HDA
Gene OntologymRNA binding6 7

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
IDA
GOA Databasenucleolus
GO:0005730
HDA
Gene Ontologynucleolus8
GO:0042788
IDA
GOA Databasepolysomal ribosome
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IDA
ISM
Gene Ontologycytoplasm3
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
Gene Ontologynucleus3
GO:0022625
IDA
GOA Databasecytosolic large ribosomal subunit
GO:0022625
HDA
IBA
Gene Ontologycytosolic large ribosomal subunit4 9
GO:0005774
IDA
GOA Databasevacuolar membrane
GO:0005773
IDA
GOA Databasevacuole
GO:0005773
HDA
Gene Ontologyvacuole10
GO:0022626
IDA
GOA Databasecytosolic ribosome
GO:0022626
HDA
Gene Ontologycytosolic ribosome11
GO:0005829
IDA
GOA Databasecytosol
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IPI
Gene Ontologyribosome2
GO:0005840
IEA
InterProribosome
GO:0005794
RCA
Gene OntologyGolgi apparatus12
GO:0000325
HDA
Gene Ontologyplant-type vacuole13
GO:0005576
HDA
Gene Ontologyextracellular region14

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036920 Ribosomal protein L10e/L16 superfamily
IPR001197 Ribosomal protein L10e
IPR016180 Ribosomal protein L10e/L16
Mapman id Description
17.1.2.1.9 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL10