Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaC01g04582 ChrC01 - View
BcaB01g01753 ChrB01 + View
BcaC04g21243 ChrC04 + View
BcaC03g16265 ChrC03 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G10080 LG-9 - View
Aethionema arabicum Aa31LG6G4480 LG-6 - View
Arabidopsis lyrata AL6G47510 scaffold_6 + View
Arabidopsis thaliana AT4G12570 ubiquitin protein ligase 5 Knock-out mutants showed accelerated senescence of leaves. ubiquitin protein ligase 5 (UPL5)%3B CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956)%2C Ubiquitin (InterPro:IPR000626)%2C Ubiquitin supergroup (InterPro:IPR019955)%2C HECT (InterPro:IPR000569)%3B BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 1 (TAIR:AT1G55860.1)%3B Has 13201 Blast hits to 8328 proteins in 676 species: Archae - 0%3B Bacteria - 15%3B Metazoa - 6234%3B Fungi - 1825%3B Plants - 2664%3B Viruses - 167%3B Other Eukaryotes - 2296 (source: NCBI BLink). Chr4 + View
Brassica napus A03p29780 A03 + View
Brassica napus C09p33930 C09 - View
Brassica napus A09p26780 A09 - View
Brassica napus A02p25490 A02 - View
Brassica napus C02p40600 C02 - View
Brassica napus C03p36040 C03 + View
Brassica oleracea BolC3t15914H C3 + View
Brassica oleracea BolC2t10081H C2 - View
Brassica oleracea BolC9t56229H C9 - View
Brassica rapa BraA09t38250Z A09 - View
Cardamine hirsuta CARHR253600 ubiquitin protein ligase 5 Chr8 - View
Capsella rubella Carub.0006s3184 K10591 - E3 ubiquitin-protein ligase NEDD4 (NEDD4, RSP5) scaffold_6 + View
Capsella rubella Carub.0007s1890 K10591 - E3 ubiquitin-protein ligase NEDD4 (NEDD4, RSP5) scaffold_7 - View
Eutrema salsugineum Thhalv10028412m.g K10591 - E3 ubiquitin-protein ligase NEDD4 (NEDD4, RSP5) scaffold_3 - View
Schrenkiella parvula Sp6g04940 K10591 - E3 ubiquitin-protein ligase NEDD4 (NEDD4, RSP5) ch6-1 - View
Tarenaya hassleriana THA.LOC104806332 E3 ubiquitin-protein ligase UPL5-like NW_010962392.1 - View
Tarenaya hassleriana THA.LOC104813609 E3 ubiquitin-protein ligase UPL5-like NW_010960187.1 - View