Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaB01g01836 ChrB01 - View
BcaC03g16235 ChrC03 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Arabidopsis thaliana AT4G04770 ATP binding cassette protein 1 Encodes an iron-stimulated ATPase. A member of the NAP subfamily of ABC transporters. Involved in Fe-S cluster assembly. Similar to SufB. Involved in the regulation of iron homeostasis. Able to form homodimers. Interacts with AtNAP7 inside the chloroplast. ATP binding cassette protein 1 (ABC1)%3B FUNCTIONS IN: protein binding%2C ATPase activity%2C coupled to transmembrane movement of substances%2C transporter activity%3B INVOLVED IN: cellular iron ion homeostasis%2C regulation of response to red or far red light%2C iron-sulfur cluster assembly%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: SUF system FeS cluster assembly%2C SufB (InterPro:IPR010231)%2C SUF system FeS cluster assembly%2C SufBD (InterPro:IPR000825)%3B BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD superfamily protein (TAIR:AT5G44316.1)%3B Has 12037 Blast hits to 11965 proteins in 1962 species: Archae - 330%3B Bacteria - 6550%3B Metazoa - 4%3B Fungi - 1%3B Plants - 99%3B Viruses - 0%3B Other Eukaryotes - 5053 (source: NCBI BLink). Chr4 - View
Brassica napus A09p26110 A09 + View
Brassica napus C02p40090 C02 + View
Brassica napus A02p25270 A02 + View
Brassica napus C09p33150 C09 + View
Brassica oleracea BolC9t56149H C9 + View
Brassica oleracea BolC2t10037H C2 + View
Brassica rapa BraA09t38178Z A09 + View
Brassica rapa BraA02t07513Z A02 + View
Cardamine hirsuta CARHR252770 FeS assembly protein SufB Chr8 + View
Chenopodium quinoa AUR62021968 ABCI8: UPF0051 protein ABCI8, chloroplastic C_Quinoa_Scaffold_1862 - View
Chenopodium quinoa AUR62012688 ABCI8: UPF0051 protein ABCI8, chloroplastic C_Quinoa_Scaffold_2715 + View
Capsella rubella Carub.0006s3269 K07033 - uncharacterized protein (K07033) scaffold_6 - View
Durio zibethinus Duzib192G0236 NW_019168037.1 - View
Eutrema salsugineum Thhalv10028516m.g PTHR30508:SF1 - UPF0051 PROTEIN ABCI8, CHLOROPLASTIC-RELATED scaffold_3 + View
Gossypium hirsutum Gohir.D05G172700 PTHR30508:SF1 - UPF0051 PROTEIN ABCI8, CHLOROPLASTIC-RELATED D05 + View
Gossypium hirsutum Gohir.A05G169500 PTHR30508:SF1 - UPF0051 PROTEIN ABCI8, CHLOROPLASTIC-RELATED A05 + View
Gossypium raimondii Gorai.009G177900 Chr09 + View
Manihot esculenta Manes.16G008200 Chromosome16 - View
Sechium edule Sed0003265 LG08 + View
Solanum lycopersicum Solyc03g031700.4 Fe-S cluster assembly protein SufB (AHRD V3.3 *** A0A1P8DZ57_9SPHI) SL4.0ch03 - View
Schrenkiella parvula Sp6g04170 K07033 - uncharacterized protein (K07033) ch6-1 + View
Solanum pennellii Sopen03g005570 Encodes an iron-stimulated ATPase. A member of the NAP subfamily of ABC transporters. Involved in Fe-S cluster assembly. Similar to SufB. Involved in the regulation of iron homeostasis. Able to form homodimers. Interacts with AtNAP7 inside the chloroplast. | ATP binding cassette protein 1 (ABC1) | FUNCTIONS IN: protein binding, ATPase activity, coupled to transmembrane movement of substances, transporter activity | INVOLVED IN: cellular iron ion homeostasis, regulation of response to red or far red light, iron-sulfur cluster assembly | LOCATED IN: chloroplast | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: SUF system FeS cluster assembly, SufB , SUF system FeS cluster assembly, SufBD | BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD superfamily protein Spenn-ch03 - View
Solanum pennellii Sopen02g025130 Encodes an iron-stimulated ATPase. A member of the NAP subfamily of ABC transporters. Involved in Fe-S cluster assembly. Similar to SufB. Involved in the regulation of iron homeostasis. Able to form homodimers. Interacts with AtNAP7 inside the chloroplast. | ATP binding cassette protein 1 (ABC1) | FUNCTIONS IN: protein binding, ATPase activity, coupled to transmembrane movement of substances, transporter activity | INVOLVED IN: cellular iron ion homeostasis, regulation of response to red or far red light, iron-sulfur cluster assembly | LOCATED IN: chloroplast | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: SUF system FeS cluster assembly, SufB , SUF system FeS cluster assembly, SufBD | BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD superfamily protein Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400005080 Non-intrinsic ABC protein ST4.03ch03 - View