Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaC03g16112 ChrC03 + View
BcaB01g02061 ChrB01 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G1920 LG-5 + View
Actinidia chinensis Actinidia21029 Lachesis_group9 + View
Arabidopsis lyrata AL6G50870 scaffold_6 - View
Amaranthus hybridus Ah.15g092990 Putative GTP diphosphokinase RSH1, chloroplastic (EC 2.7.6.5) (RelA/SpoT homolog 1) (AtRSH1) (ppGpp synthetase RSH1) AmaHy_arrow1_Scaffold_15 + View
Arabidopsis thaliana AT4G02260 RELA/SPOT homolog 1 RELA/SPOT homolog 1 (RSH1)%3B FUNCTIONS IN: catalytic activity%3B INVOLVED IN: response to wounding%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase%2C HD subdomain (InterPro:IPR006674)%2C TGS-like (InterPro:IPR012676)%2C TGS (InterPro:IPR004095)%2C Metal-dependent phosphohydrolase%2C HD domain (InterPro:IPR003607)%2C Beta-grasp fold%2C ferredoxin-type (InterPro:IPR012675)%2C RelA/SpoT (InterPro:IPR007685)%3B BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 3 (TAIR:AT1G54130.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). RELA/SPOT homolog 1 (RSH1)%3B FUNCTIONS IN: catalytic activity%3B INVOLVED IN: response to wounding%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase%2C HD subdomain (InterPro:IPR006674)%2C TGS-like (InterPro:IPR012676)%2C TGS (InterPro:IPR004095)%2C Metal-dependent phosphohydrolase%2C HD domain (InterPro:IPR003607)%2C Beta-grasp fold%2C ferredoxin-type (InterPro:IPR012675)%2C RelA/SpoT (InterPro:IPR007685)%3B BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 3 (TAIR:AT1G54130.1)%3B Has 11651 Blast hits to 11635 proteins in 2465 species: Archae - 10%3B Bacteria - 7456%3B Metazoa - 100%3B Fungi - 4%3B Plants - 211%3B Viruses - 4%3B Other Eukaryotes - 3866 (source: NCBI BLink). Chr4 + View
Brassica napus A09p01720 A09 + View
Brassica napus C02p38830 C02 + View
Brassica napus A02p24590 A02 + View
Brassica oleracea BolC9t53114H C9 + View
Brassica oleracea BolC2t09898H C2 + View
Brassica rapa BraA02t07450Z A02 + View
Corylus avellana Haze_04975 Similar to RSH1: Putative GTP diphosphokinase RSH1, chloroplastic (Arabidopsis thaliana OX%3D3702) 2 + View
Coffea canephora Cc01_g21070 Putative GTP pyrophosphokinase chr1 + View
Citrus clementina Ciclev10018801m.g scaffold_3 + View
Cardamine hirsuta CARHR250470 GTP pyrophosphokinase (RelA/SpoT) Chr8 + View
Citrullus lanatus ClCG10G011110 GTP pyrophosphokinase CG_Chr10 + View
Capsella rubella Carub.0006s3491 PTHR21262:SF13 - RELA-SPOT LIKE PROTEIN RSH1 scaffold_6 - View
Daucus carota DCAR_018318 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv33073 GWHABJS00000010 + View
Durio zibethinus Duzib211G0167 NW_019168049.1 - View
Erythranthe guttata Migut.D00133 scaffold_4 - View
Eutrema salsugineum Thhalv10028413m.g scaffold_3 + View
Fragaria x ananassa FAN27G1041 2.7.6.5//3.1.7.2 - GTP diphosphokinase / Stringent factor // Guanosine-3',5'-bis(diphosphate) 3'-diphosphatase / Penta-phosphate guanosine-3'-pyrophosphohydrolase Fvb2-1 + View
Fragaria x ananassa FAN15G2312 2.7.6.5//3.1.7.2 - GTP diphosphokinase / Stringent factor // Guanosine-3',5'-bis(diphosphate) 3'-diphosphatase / Penta-phosphate guanosine-3'-pyrophosphohydrolase Fvb2-4 + View
Fragaria vesca FvH4_2g26030 2.7.6.5//3.1.7.2 - GTP diphosphokinase / Stringent factor // Guanosine-3',5'-bis(diphosphate) 3'-diphosphatase / Penta-phosphate guanosine-3'-pyrophosphohydrolase Fvb2 + View
Gossypium hirsutum Gohir.D08G051750 PTHR21262:SF13 - RELA-SPOT LIKE PROTEIN RSH1 D08 - View
Gossypium hirsutum Gohir.A08G041800 PTHR21262:SF13 - RELA-SPOT LIKE PROTEIN RSH1 A08 - View
Glycine max Glyma.03G216400 PTHR21262:SF13 - RELA-SPOT LIKE PROTEIN RSH1 Gm03 + View
Glycine max Glyma.19G212900 PTHR21262:SF13 - RELA-SPOT LIKE PROTEIN RSH1 Gm19 + View
Lupinus albus Lalb_Chr18g0046881 2.7.6.5//3.1.7.2 - GTP diphosphokinase / Stringent factor // Guanosine-3',5'-bis(diphosphate) 3'-diphosphatase / Penta-phosphate guanosine-3'-pyrophosphohydrolase Lalb_Chr18 - View
Lotus japonicus Lj1g0005208 PTHR21262:SF13 - RELA-SPOT LIKE PROTEIN RSH1 chr1 + View
Lonicera japonica Lj1C22T13 GWHAAZE00000001 - View
Malus domestica MD11G1306700 RELA/SPOT homolog 1 Chr11 - View
Punica granatum PGR119G1482 NC_045132.1 + View
Prunus persica Prupe.8G264600 3.1.7.2 - Guanosine-3',5'-bis(diphosphate) 3'-diphosphatase / Penta-phosphate guanosine-3'-pyrophosphohydrolase Pp08 + View
Phaseolus vulgaris Phvul.001G209900 PTHR21262:SF13 - RELA-SPOT LIKE PROTEIN RSH1 Chr01 + View
Quercus lobata QL12p027872 12 - View
Rosa chinensis RcHm_v2.0_Chr6g0294391 RcHm_v2.0_Chr6 + View
Solanum lycopersicum Solyc09g075390.4 GTP pyrophosphokinase, (P)ppGpp synthetase II Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase (AHRD V3.3 *** A0A2D1JZR2_9GAMM) SL4.0ch09 - View
Schrenkiella parvula Sp6g02150 PTHR21262:SF13 - RELA-SPOT LIKE PROTEIN RSH1 ch6-1 + View
Solanum pennellii Sopen09g030160 RELA/SPOT homolog 1 (RSH1) | FUNCTIONS IN: catalytic activity | INVOLVED IN: response to wounding | LOCATED IN: chloroplast | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain , TGS-like , TGS , Metal-dependent phosphohydrolase, HD domain , Beta-grasp fold, ferredoxin-type , RelA/SpoT | BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 3 Spenn-ch09 - View
Solanum tuberosum PGSC0003DMG400031817 RelA-SpoT RSH1 ST4.03ch09 - View
Selenicereus undatus Hund05446 Scaffold_19641 + View
Theobroma cacao Thecc.01G304700 RELA/SPOT Chromosome_1 + View
Tarenaya hassleriana THA.LOC104801287 putative GTP diphosphokinase RSH1%2C chloroplastic isoform X1 NW_010969548.1 - View
Trifolium pratense TPR.G9647 Tp57577_TGAC_v2_LG6 - View
Tripterygium wilfordii TWI14G0472 NC_052249.1 - View
Vaccinium macrocarpon vmacro15139 Similar to RSH1: Putative GTP diphosphokinase RSH1, chloroplastic (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View