Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaB02g09943 ChrB02 - View
BcaC07g39477 ChrC07 + View
BcaB01g00636 ChrB01 - View
BcaC09g50006 ChrC09 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G15770 LG-1 - View
Arabidopsis lyrata AL5G30210 scaffold_5 + View
Arabidopsis lyrata AL8G44100 scaffold_8 + View
Avicennia marina MSTRG.2860 ScioBoG_102835_HRSCAF_103059 + View
Arabidopsis thaliana AT3G50090 Exonuclease family protein Exonuclease family protein%3B FUNCTIONS IN: exonuclease activity%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: intracellular%3B CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055)%2C Polynucleotidyl transferase%2C ribonuclease H fold (InterPro:IPR012337)%2C Exonuclease%2C RNase T/DNA polymerase III (InterPro:IPR013520)%3B BEST Arabidopsis thaliana protein match is: small RNA degrading nuclease 1 (TAIR:AT3G50100.1)%3B Has 1396 Blast hits to 1380 proteins in 227 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 618%3B Fungi - 412%3B Plants - 213%3B Viruses - 0%3B Other Eukaryotes - 149 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT5G67240 small RNA degrading nuclease 3 small RNA degrading nuclease 3 (SDN3)%3B FUNCTIONS IN: exonuclease activity%2C nucleic acid binding%3B LOCATED IN: intracellular%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055)%2C Polynucleotidyl transferase%2C ribonuclease H fold (InterPro:IPR012337)%2C Exonuclease%2C RNase T/DNA polymerase III (InterPro:IPR013520)%3B BEST Arabidopsis thaliana protein match is: small RNA degrading nuclease 1 (TAIR:AT3G50100.1)%3B Has 2616 Blast hits to 2408 proteins in 300 species: Archae - 3%3B Bacteria - 109%3B Metazoa - 996%3B Fungi - 649%3B Plants - 362%3B Viruses - 0%3B Other Eukaryotes - 497 (source: NCBI BLink). Chr5 - View
Brassica napus A09p43220 A09 + View
Brassica napus C07p24460 C07 + View
Brassica napus C01p30070 C01 - View
Brassica napus A01p24270 A01 - View
Brassica napus C08p25210 C08 + View
Brassica oleracea BolC1t02949H C1 - View
Brassica oleracea BolC7t42966H C7 + View
Brassica oleracea BolC8t50143H C8 + View
Brassica rapa BraA07t29397Z A07 + View
Brassica rapa BraA09t39792Z A09 + View
Brassica rapa BraA01t02340Z A01 - View
Corylus avellana Haze_15356 Similar to SDN3: Small RNA degrading nuclease 3 (Arabidopsis thaliana OX%3D3702) 11 + View
Cardamine hirsuta CARHR280390 RNA exonuclease 1 Chr8 + View
Carya illinoinensis CiPaw.02G006400 PTHR12801//PTHR12801:SF69 - EXONUCLEASE // RNA EXONUCLEASE NEF-SP-RELATED Chr02 + View
Citrullus lanatus ClCG01G017040 RNA exonuclease 1 CG_Chr01 - View
Cucumis melo MELO3C007581.2 small RNA degrading nuclease 1 chr08 - View
Carica papaya Cpa.g.sc55.98 supercontig_55 + View
Capsella rubella Carub.0005s1644 scaffold_5 + View
Capsella rubella Carub.0008s2727 K14570 - RNA exonuclease 1 (REX1, REXO1, RNH70) scaffold_8 + View
Cucumis sativus L. CsaV3_6G043510 small RNA degrading nuclease 1 chr6 - View
Davidia involucrata Dinv26859 GWHABJS00000014 - View
Durio zibethinus Duzib147G1492 NW_019168470.1 + View
Eutrema salsugineum Thhalv10003942m.g K14570 - RNA exonuclease 1 (REX1, REXO1, RNH70) scaffold_6 - View
Eutrema salsugineum Thhalv10010950m.g K14570 - RNA exonuclease 1 (REX1, REXO1, RNH70) scaffold_16 - View
Fragaria x ananassa FAN28G2117 K14570 - RNA exonuclease 1 (REX1, REXO1, RNH70) Fvb1-1 + View
Fragaria vesca FvH4_1g16590 K14570 - RNA exonuclease 1 (REX1, REXO1, RNH70) Fvb1 - View
Lupinus albus Lalb_Chr16g0378691 PTHR12801:SF69 - RNA EXONUCLEASE NEF-SP-RELATED Lalb_Chr16 - View
Lonicera japonica Lj7A76T78 GWHAAZE00000007 - View
Malus domestica MD02G1178000 small RNA degrading nuclease 3 Chr02 - View
Malus domestica MD15G1287900 small RNA degrading nuclease 3 Chr15 - View
Punica granatum PGR004G0567 NC_045131.1 - View
Populus trichocarpa Potri.007G048000 PTHR12801//PTHR12801:SF69 - EXONUCLEASE // RNA EXONUCLEASE NEF-SP-RELATED Chr07 - View
Salix brachista Sabra07G0043000 GWHAAZH00000007 - View
Schrenkiella parvula Sp2g29430 K14570 - RNA exonuclease 1 (REX1, REXO1, RNH70) ch2-4 + View
Schrenkiella parvula Sp5g12020 K14570 - RNA exonuclease 1 (REX1, REXO1, RNH70) ch5-1 - View
Theobroma cacao Thecc.01G062600 Exonuclease Chromosome_1 - View
Tarenaya hassleriana THA.LOC104827394 small RNA degrading nuclease 1-like NW_010960188.1 - View
Tripterygium wilfordii TWI09G0103 NC_052245.1 - View
Tripterygium wilfordii TWI73G0964 NC_052232.1 + View