Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BcaB01g00735 | ChrB01 | - | View | |
BcaC09g49933 | ChrC09 | + | View | |
BcaC07g39395 | ChrC07 | + | View |
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Arabidopsis thaliana | AT3G49240 | Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1796 (emb1796)%3B FUNCTIONS IN: ATP binding%3B INVOLVED IN: embryo development ending in seed dormancy%3B LOCATED IN: mitochondrion%2C chloroplast%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%2C Tetratricopeptide-like helical (InterPro:IPR011990)%3B BEST Arabidopsis thaliana protein match is: glutamine-rich protein 23 (TAIR:AT1G10270.1)%3B Has 36492 Blast hits to 13612 proteins in 345 species: Archae - 36%3B Bacteria - 141%3B Metazoa - 341%3B Fungi - 345%3B Plants - 34345%3B Viruses - 0%3B Other Eukaryotes - 1284 (source: NCBI BLink). | Chr3 | + | View |
Brassica napus | A06p18520 | A06 | - | View | |
Brassica napus | C01p31050 | C01 | - | View | |
Brassica napus | A01p24850 | A01 | - | View | |
Brassica oleracea | BolC8t50041H | C8 | + | View | |
Brassica oleracea | BolC1t03040H | C1 | - | View | |
Brassica rapa | BraA06t24930Z | A06 | - | View | |
Brassica rapa | BraA01t02398Z | A01 | - | View | |
Cardamine hirsuta | CARHR158100 | Pentatricopeptide repeat-containing protein | Chr5 | + | View |
Capsella rubella | Carub.0005s1546 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | scaffold_5 | + | View |
Eutrema salsugineum | Thhalv10010207m.g | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | scaffold_16 | - | View |
Schrenkiella parvula | Sp5g12840 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | ch5-1 | - | View |