Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaC07g39287 ChrC07 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G16650 LG-4 - View
Arabidopsis lyrata AL5G27330 scaffold_5 - View
Arabidopsis thaliana AT3G48010 cyclic nucleotide-gated channel 16 member of Cyclic nucleotide gated channel family cyclic nucleotide-gated channel 16 (CNGC16)%3B FUNCTIONS IN: ion channel activity%2C cyclic nucleotide binding%2C calmodulin binding%3B INVOLVED IN: ion transport%2C transmembrane transport%3B LOCATED IN: membrane%3B EXPRESSED IN: male gametophyte%2C flower%2C pollen tube%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%3B CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595)%2C Ion transport (InterPro:IPR005821)%2C Cyclic nucleotide-binding-like (InterPro:IPR018490)%2C RmlC-like jelly roll fold (InterPro:IPR014710)%3B BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 18 (TAIR:AT5G14870.1)%3B Has 3330 Blast hits to 3084 proteins in 251 species: Archae - 0%3B Bacteria - 33%3B Metazoa - 1612%3B Fungi - 37%3B Plants - 1021%3B Viruses - 0%3B Other Eukaryotes - 627 (source: NCBI BLink). Chr3 - View
Brassica napus A06p19630 A06 + View
Brassica napus C08p22930 C08 - View
Brassica oleracea BolC8t49931H C8 - View
Brassica rapa BraA06t25043Z A06 + View
Cardamine hirsuta CARHR156730 cyclic nucleotide-gated channel 16 Chr5 - View
Capsella rubella Carub.0005s1412 PTHR10217//PTHR10217:SF479 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED scaffold_5 - View
Eutrema salsugineum Thhalv10010934m.g PTHR10217:SF479 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED scaffold_16 + View
Gossypium hirsutum Gohir.D09G165300 PTHR10217//PTHR10217:SF479 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED D09 - View
Schrenkiella parvula Sp5g13970 PTHR10217//PTHR10217:SF479 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED ch5-1 + View