Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaC03g13746 ChrC03 + View
BcaC04g19415 ChrC04 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Arabidopsis lyrata AL6G31800 scaffold_6 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.1YYJ7Z K06617 - raffinose synthase (E2.4.1.82) arahy.Tifrunner.gnm1.Arahy.13 - View
Arabidopsis thaliana AT5G20250 Raffinose synthase family protein encodes a member of glycosyl hydrolase family 36. Expression is induced within 3 hours of dark treatment%2C in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell. DARK INDUCIBLE 10 (DIN10)%3B FUNCTIONS IN: hydrolase activity%2C hydrolyzing O-glycosyl compounds%3B INVOLVED IN: response to karrikin%2C aging%2C response to light stimulus%2C response to cold%2C response to sucrose stimulus%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Glycoside hydrolase%2C catalytic core (InterPro:IPR017853)%2C Raffinose synthase (InterPro:IPR008811)%3B BEST Arabidopsis thaliana protein match is: seed imbibition 2 (TAIR:AT3G57520.1)%3B Has 568 Blast hits to 539 proteins in 163 species: Archae - 27%3B Bacteria - 128%3B Metazoa - 0%3B Fungi - 82%3B Plants - 321%3B Viruses - 0%3B Other Eukaryotes - 10 (source: NCBI BLink). Chr5 + View
Brassica napus A02p06130 A02 + View
Brassica napus C09p55950 C09 - View
Brassica napus A10p19690 A10 - View
Brassica napus BNapus_Darmor_BZH_scaffold_38p01710 BNapus_Darmor_BZH_scaffold_38 - View
Brassica oleracea BolC2t07030H C2 + View
Brassica rapa BraA10t44044Z A10 - View
Brassica rapa BraA02t05563Z A02 + View
Coffea canephora Cc06_g08070 Probable galactinol--sucrose galactosyltransferase 6 chr6 + View
Cardamine hirsuta CARHR192580 Stachyose synthase, putative Chr6 - View
Citrullus lanatus ClCG06G011490 Alkaline alpha galactosidase 3 CG_Chr06 - View
Cucumis melo MELO3C010314.2 Raffinose synthase chr02 + View
Capsella rubella Carub.0006s1864 PTHR31268:SF5 - GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 6-RELATED scaffold_6 + View
Davidia involucrata Dinv36479 GWHABJS00000001 + View
Durio zibethinus Duzib168G2387 The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon NW_019168159.1 + View
Durio zibethinus Duzib150G0955 NW_019167882.1 - View
Erythranthe guttata Migut.K00425 scaffold_11 + View
Eutrema salsugineum Thhalv10012821m.g PTHR31268:SF5 - GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 6-RELATED scaffold_2 + View
Glycine max Glyma.17G111400 PTHR31268:SF5 - GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 6-RELATED Gm17 + View
Lupinus albus Lalb_Chr13g0301581 PTHR31268:SF5 - GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 6-RELATED Lalb_Chr13 + View
Lonicera japonica Lj7A433T53 GWHAAZE00000007 + View
Populus trichocarpa Potri.018G126400 PTHR31268:SF5 - GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 6-RELATED Chr18 + View
Populus trichocarpa Potri.006G065700 PTHR31268:SF5 - GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 6-RELATED Chr06 + View
Salvia bowleyana SalBow1G6103 GWHASIU00000001 - View
Simmondsia chinensis Sc08g0006290 GWHAASQ00000008 + View
Solanum lycopersicum Solyc07g007930.3 Raffinose synthase family protein (AHRD V3.3 *** F4K470_ARATH) SL4.0ch07 + View
Schrenkiella parvula Sp6g24160 PTHR31268//PTHR31268:SF5 - FAMILY NOT NAMED // GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 6-RELATED ch6-6 - View
Solanum pennellii Sopen07g003810 encodes a member of glycosyl hydrolase family 36. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the genes expression pattern is responding to the level of sugar in the cell. | DARK INDUCIBLE 10 (DIN10) | CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core , Raffinose synthase | BEST Arabidopsis thaliana protein match is: seed imbibition 2 ., Raffinose synthase, Stachyose synthase precursor (EC 2.4.1.67) (Galactinol--raffinose galactosyltransferase) - Pisum sativum (Garden pea) Spenn-ch07 + View
Selenicereus undatus Hund26537 Scaffold_2055 + View
Tarenaya hassleriana THA.LOC104811023 probable galactinol--sucrose galactosyltransferase 6 isoform X1 NW_010965304.1 - View
Tripterygium wilfordii TWI63G0170 NC_052240.1 - View