Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaB08g36202 ChrB08 - View
BcaC04g19657 ChrC04 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G12140 LG-1 + View
Arabidopsis lyrata AL8G36610 scaffold_8 + View
Arabidopsis thaliana AT5G60020 laccase 17 LAC17 appears to have laccase activity based on enzyme assays performed using lac17 mutants. Notably%2C these mutants appear to have a reduced deposition of G lignin units. LAC17 is expressed in interfascicular fibers and likely contributes to lignin biosynthesis%2C and hence%2C cell wall biosynthesis%2C there. laccase 17 (LAC17)%3B FUNCTIONS IN: laccase activity%3B INVOLVED IN: oxidation reduction%2C lignin catabolic process%3B LOCATED IN: endomembrane system%2C apoplast%3B EXPRESSED IN: 14 plant structures%3B EXPRESSED DURING: LP.04 four leaves visible%2C 4 anthesis%2C C globular stage%2C petal differentiation and expansion stage%2C LP.12 twelve leaves visible%3B CONTAINS InterPro DOMAIN/s: Multicopper oxidase%2C type 3 (InterPro:IPR011707)%2C Laccase (InterPro:IPR017761)%2C Multicopper oxidase%2C type 2 (InterPro:IPR011706)%2C Cupredoxin (InterPro:IPR008972)%2C Multicopper oxidase%2C copper-binding site (InterPro:IPR002355)%2C Multicopper oxidase%2C type 1 (InterPro:IPR001117)%3B BEST Arabidopsis thaliana protein match is: laccase 2 (TAIR:AT2G29130.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Brassica napus C02p11940 C02 - View
Brassica napus A10p17210 A10 + View
Brassica napus C09p52530 C09 + View
Brassica napus A03p11370 A03 - View
Brassica napus A02p06650 A02 - View
Brassica napus C03p13120 C03 - View
Brassica oleracea BolC9t58119H C9 + View
Brassica oleracea BolC2t07292H C2 - View
Brassica oleracea BolC3t13775H C3 - View
Brassica rapa BraA03t10451Z A03 - View
Brassica rapa BraA10t43805Z A10 + View
Brassica rapa BraA02t05747Z A02 - View
Cannabis sativa CANSAT54G0593 NC_044375.1 + View
Cardamine hirsuta CARHR273650 laccase 17 Chr8 + View
Carya illinoinensis CiPaw.13G103400 PTHR11709//PTHR11709:SF73 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED Chr13 + View
Capsella rubella Carub.0008s2072 PTHR11709//PTHR11709:SF66 - MULTI-COPPER OXIDASE // LACCASE-17 scaffold_8 + View
Eucalyptus grandis Eucgr.B02428 Chr02 - View
Eutrema salsugineum Thhalv10013109m.g PTHR11709:SF66 - LACCASE-17 scaffold_2 - View
Fragaria x ananassa FAN25G2044 PTHR11709//PTHR11709:SF70 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED Fvb3-1 + View
Gossypium hirsutum Gohir.A05G099400 PTHR11709//PTHR11709:SF66 - MULTI-COPPER OXIDASE // LACCASE-17 A05 - View
Gossypium hirsutum Gohir.D05G099300 PTHR11709//PTHR11709:SF66 - MULTI-COPPER OXIDASE // LACCASE-17 D05 - View
Gossypium raimondii Gorai.009G103200 Chr09 - View
Malus domestica MD03G1106500 laccase 17 Chr03 + View
Malus domestica MD11G1118900 laccase 17 Chr11 + View
Manihot esculenta Manes.04G027900 Chromosome04 - View
Manihot esculenta Manes.11G137900 Chromosome11 + View
Punica granatum PGR102G1655 NC_045129.1 + View
Prunus persica Prupe.6G089100 PTHR11709//PTHR11709:SF73 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED Pp06 + View
Schrenkiella parvula Sp6g21680 PTHR11709//PTHR11709:SF66 - MULTI-COPPER OXIDASE // LACCASE-17 ch6-6 + View
Solanum pennellii Sopen06g032740 putative laccase, knockout mutant had reduced root elongation under PEG-induced dehydration | laccase 2 (LAC2) | FUNCTIONS IN: laccase activity | INVOLVED IN: response to water deprivation | LOCATED IN: endomembrane system, apoplast | EXPRESSED IN: 6 plant structures | EXPRESSED DURING: petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 , Laccase , Multicopper oxidase, type 2 , Cupredoxin , Multicopper oxidase, copper-binding site , Multicopper oxidase, type 1 | BEST Arabidopsis thaliana protein match is: laccase 17 Spenn-ch06 - View
Selenicereus undatus Hund05025 Scaffold_19641 + View
Theobroma cacao Thecc.05G073200 Laccase 11 Chromosome_5 + View
Theobroma cacao Thecc.09G331700 Laccase 17 Chromosome_9 - View
Tarenaya hassleriana THA.LOC104814851 laccase-17-like NW_010965541.1 + View
Tarenaya hassleriana THA.LOC104810824 laccase-17 NW_010965304.1 + View
Tripterygium wilfordii TWI75G0752 NC_052253.1 - View
Vitis vinifera GSVIVG01025077001 chr6 - View