Gene: Sopen06g032740
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen06g032740
- Transcript Identifier Sopen06g032740.1
- Gene Type Coding gene
- Location Spenn-ch06 : 58420376-58423116 : negative
Gene Family Information
- ID HOM05D000080
- #Genes/#Species 3730/98
- Phylogenetic origin
- ID ORTHO05D000053
- #Genes/#Species 2731/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen06g032740.1
Descriptions
- Description putative laccase, knockout mutant had reduced root elongation under PEG-induced dehydration | laccase 2 (LAC2) | FUNCTIONS IN: laccase activity | INVOLVED IN: response to water deprivation | LOCATED IN: endomembrane system, apoplast | EXPRESSED IN: 6 plant structures | EXPRESSED DURING: petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 , Laccase , Multicopper oxidase, type 2 , Cupredoxin , Multicopper oxidase, copper-binding site , Multicopper oxidase, type 1 | BEST Arabidopsis thaliana protein match is: laccase 17
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046274 | IEA | InterPro | lignin catabolic process | |
| GO:0080022 | ISO | PLAZA Integrative Orthology | primary root development | AT2G29130 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT2G29130 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005507 | IEA | InterPro | copper ion binding | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0052716 | IEA | InterPro | hydroquinone:oxygen oxidoreductase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048046 | IEA | InterPro | apoplast |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR034288 | Laccase, first cupredoxin domain |
| IPR008972 | Cupredoxin |
| IPR011706 | Multicopper oxidase, C-terminal |
| IPR011707 | Multicopper oxidase, N-termianl |
| IPR034285 | Laccase, second cupredoxin domain |
| IPR034289 | Laccase, third cupredoxin domain |
| IPR001117 | Multicopper oxidase, type 1 |
| IPR045087 | Multicopper oxidase |
| IPR017761 | Laccase |
| Mapman id | Description |
|---|---|
| 21.6.2.2 | Cell wall organisation.lignin.monolignol conjugation and polymerization.lignin laccase |