Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaB01g05715 ChrB01 + View
BcaB01g05945 ChrB01 - View
BcaC03g13157 ChrC03 - View
BcaC06g32242 ChrC06 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G6340 LG-11 - View
Actinidia chinensis Actinidia34485 Lachesis_group15 - View
Actinidia chinensis Actinidia33884 Lachesis_group3 + View
Arabidopsis lyrata AL6G15210 scaffold_6 - View
Amaranthus hybridus Ah.10g036000 AmaHy_arrow1_Scaffold_10 - View
Arabidopsis thaliana AT5G05340 Peroxidase superfamily protein Encodes a protein with sequence similarity to peroxidases that is involved in lignin biosynthesis. Loss of function mutations show abnormal development of xylem fibers and reduced levels of lignin biosynthetic enxymes. Peroxidase superfamily protein%3B FUNCTIONS IN: protein binding%2C peroxidase activity%3B INVOLVED IN: response to oxidative stress%2C oxidation reduction%3B LOCATED IN: apoplast%2C cell wall%3B EXPRESSED IN: 9 plant structures%3B EXPRESSED DURING: LP.04 four leaves visible%2C 4 anthesis%2C C globular stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255)%2C Plant peroxidase (InterPro:IPR000823)%2C Peroxidases heam-ligand binding site (InterPro:IPR019793)%2C Haem peroxidase%2C plant/fungal/bacterial (InterPro:IPR002016)%2C Peroxidase%2C active site (InterPro:IPR019794)%3B BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica napus A10p30870 A10 + View
Brassica napus C09p71370 C09 + View
Brassica napus C03p02600 C03 - View
Brassica napus A03p02260 A03 - View
Brassica napus C02p02290 C02 - View
Brassica oleracea BolC9t59900H C9 + View
Brassica oleracea BolC3t12812H C3 - View
Brassica oleracea BolC2t06196H C2 - View
Brassica rapa BraA10t45131Z A10 + View
Brassica rapa BraA03t09590Z A03 - View
Brassica rapa BraA02t04845Z A02 - View
Cannabis sativa CANSAT25G2066 NC_044370.1 - View
Cardamine hirsuta CARHR207910 Peroxidase superfamily protein Chr6 + View
Carya illinoinensis CiPaw.02G197800 PTHR31388//PTHR31388:SF24 - FAMILY NOT NAMED // PEROXIDASE 52 Chr02 + View
Capsella rubella Carub.0006s0426 PTHR31388:SF24 - PEROXIDASE 52 scaffold_6 - View
Eutrema salsugineum Thhalv10014105m.g PTHR31388:SF24 - PEROXIDASE 52 scaffold_2 - View
Gossypium hirsutum Gohir.D05G193700 PTHR31388//PTHR31388:SF4 - FAMILY NOT NAMED // PEROXIDASE 9 D05 + View
Gossypium hirsutum Gohir.A05G190300 PTHR31388//PTHR31388:SF4 - FAMILY NOT NAMED // PEROXIDASE 9 A05 + View
Gossypium raimondii Gorai.009G198700 Chr09 + View
Lotus japonicus LjContig00357g0013628 K00430 - peroxidase (E1.11.1.7) Contig00357 + View
Lonicera japonica Lj1C964T2 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_8_13440 PTHR31388:SF24 - PEROXIDASE 52 Lsat_1_v8_lg_8 - View
Manihot esculenta Manes.05G154800 Chromosome05 + View
Punica granatum PGR142G2172 NC_045128.1 + View
Striga asiatica SGA_v2.0_scaffold201G41353 scaffold201 + View
Schrenkiella parvula Sp6g37490 PTHR31388//PTHR31388:SF24 - FAMILY NOT NAMED // PEROXIDASE 52 ch6-6 + View
Solanum tuberosum PGSC0003DMG400011640 Peroxidase ST4.03ch05 - View
Tarenaya hassleriana THA.LOC104816519 peroxidase 52 NW_010965775.1 - View
Tripterygium wilfordii TWI09G0783 NC_052245.1 - View
Vaccinium macrocarpon vmacro06929 Similar to GSVIVT00023967001: Peroxidase 4 (Vitis vinifera OX%3D29760) chr2_Vaccinium_macrocarpon_Stevens_v1 - View