Gene: AT5G05340

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G05340
  • Transcript Identifier AT5G05340.1
  • Gene Type Coding gene
  • Location Chr5 : 1579142-1580819 : negative

Gene Family Information

  • ID HOM05D000044
  • #Genes/#Species 4827/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G05340.1
  • symbol PRX52
  • full_name peroxidase 52
  • uniprot Q9FLC0

Descriptions

  • Description Peroxidase superfamily protein
  • Computational description Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042744
IEA
GOA Databasehydrogen peroxide catabolic process
GO:0042744
IEA
InterProhydrogen peroxide catabolic process
GO:0006979
IEA
Gene Ontologyresponse to oxidative stress
GO:0006979
IEA
InterProresponse to oxidative stress
GO:0098869
IEA
GOA Databasecellular oxidant detoxification
GO:1901430
IMP
Gene Ontologypositive regulation of syringal lignin biosynthetic process1
GO:0010089
IMP
Gene Ontologyxylem development1
GO:0009809
IMP
Gene Ontologylignin biosynthetic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0020037
IEA
Gene Ontologyheme binding
GO:0020037
IEA
InterProheme binding
GO:0004601
IEA
GOA Databaseperoxidase activity
GO:0004601
IEA
InterProperoxidase activity
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0005515
IPI
Gene Ontologyprotein binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
IEA
GOA Databaseextracellular region
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0005829
IDA
GOA Databasecytosol
GO:0048046
IDA
GOA Databaseapoplast
GO:0048046
HDA
Gene Ontologyapoplast3
GO:0005794
IDA
GOA DatabaseGolgi apparatus
GO:0005794
HDA
Gene OntologyGolgi apparatus4
GO:0009505
IDA
Gene Ontologyplant-type cell wall5
GO:0005618
HDA
Gene Ontologycell wall6

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002016 Haem peroxidase
IPR000823 Plant peroxidase
IPR010255 Haem peroxidase superfamily
IPR033905 Secretory peroxidase
Mapman id Description
35.1 not assigned.annotated