Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaC01g04142 ChrC01 - View
BcaB06g25649 ChrB06 - View
BcaB04g18625 ChrB04 + View
BcaC09g48213 ChrC09 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Actinidia chinensis Actinidia33919 Lachesis_group3 - View
Actinidia chinensis Actinidia34458 Lachesis_group15 + View
Arabidopsis lyrata AL6G15470 scaffold_6 + View
Arabidopsis lyrata AL3G22700 scaffold_3 + View
Amaranthus hybridus Ah.10g036590 Omega-3 fatty acid desaturase, chloroplastic (EC 1.14.19.-) AmaHy_arrow1_Scaffold_10 - View
Arabidopsis thaliana AT5G05580 fatty acid desaturase 8 Encodes a temperature sensitive plastidic fatty acid desaturase. fatty acid desaturase 8 (FAD8)%3B FUNCTIONS IN: omega-3 fatty acid desaturase activity%3B INVOLVED IN: response to temperature stimulus%2C fatty acid biosynthetic process%3B LOCATED IN: chloroplast%2C chloroplast envelope%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863)%2C Fatty acid desaturase%2C type 1 (InterPro:IPR005804)%3B BEST Arabidopsis thaliana protein match is: fatty acid desaturase 7 (TAIR:AT3G11170.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). fatty acid desaturase 8 (FAD8)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863)%2C Fatty acid desaturase%2C type 1 (InterPro:IPR005804)%3B BEST Arabidopsis thaliana protein match is: fatty acid desaturase 7 (TAIR:AT3G11170.1). Chr5 + View
Arabidopsis thaliana AT3G11170 fatty acid desaturase 7 Chloroplastic enzyme responsible for the synthesis of 16:3 and 18:3 fatty acids from galactolipids%2C sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene expression is induced by wounding in shoot and root. The wound-response in shoot is independent of jasmonic acid mediated pathway whereas the root response is mediated by jasmonic acid. fatty acid desaturase 7 (FAD7)%3B FUNCTIONS IN: omega-3 fatty acid desaturase activity%3B INVOLVED IN: response to cold%2C response to wounding%2C fatty acid biosynthetic process%2C jasmonic acid mediated signaling pathway%3B LOCATED IN: plastid membrane%2C chloroplast%2C chloroplast envelope%3B EXPRESSED IN: male gametophyte%2C guard cell%2C pollen tube%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863)%2C Fatty acid desaturase%2C type 1 (InterPro:IPR005804)%3B BEST Arabidopsis thaliana protein match is: fatty acid desaturase 8 (TAIR:AT5G05580.1)%3B Has 2938 Blast hits to 2935 proteins in 698 species: Archae - 0%3B Bacteria - 1234%3B Metazoa - 17%3B Fungi - 265%3B Plants - 926%3B Viruses - 0%3B Other Eukaryotes - 496 (source: NCBI BLink). Chr3 + View
Brassica napus C03p44720 C03 + View
Brassica napus A05p38120 A05 - View
Brassica napus C02p02430 C02 + View
Brassica napus A03p36930 A03 + View
Brassica oleracea BolC1t05331H C1 - View
Brassica oleracea BolC2t06206H C2 + View
Brassica oleracea BolC5t34357H C5 - View
Brassica oleracea BolC3t16734H C3 + View
Brassica rapa BraA02t04855Z A02 + View
Brassica rapa BraA05t22604Z A05 - View
Brassica rapa BraA01t04197Z A01 - View
Brassica rapa BraA03t12855Z A03 + View
Corylus avellana Haze_17236 Similar to FAD7A-1: Omega-3 fatty acid desaturase, chloroplastic (Ricinus communis OX%3D3988) 11 - View
Coffea canephora Cc02_g06400 Omega-3 fatty acid desaturase, chloroplastic chr2 + View
Cardamine hirsuta CARHR085740 Omega-3 fatty acid desaturase Chr3 + View
Carya illinoinensis CiPaw.02G193200 PTHR32100:SF17 - OMEGA-3 FATTY ACID DESATURASE, ENDOPLASMIC RETICULUM Chr02 - View
Capsella rubella Carub.0003s1049 K10257 - omega-3 fatty acid desaturase (delta-15 desaturase) (FAD8, desB) scaffold_3 + View
Capsella rubella Carub.0006s0448 K10257 - omega-3 fatty acid desaturase (delta-15 desaturase) (FAD8, desB) scaffold_6 + View
Eutrema salsugineum Thhalv10013625m.g K10257 - omega-3 fatty acid desaturase (delta-15 desaturase) (FAD8, desB) scaffold_2 + View
Eutrema salsugineum Thhalv10020755m.g K10257 - omega-3 fatty acid desaturase (delta-15 desaturase) (FAD8, desB) scaffold_13 - View
Fragaria x ananassa FAN01G1736 PTHR32100:SF17 - OMEGA-3 FATTY ACID DESATURASE, ENDOPLASMIC RETICULUM Fvb7-4 + View
Fragaria vesca FvH4_7g24580 K10257 - omega-3 fatty acid desaturase (delta-15 desaturase) (FAD8, desB) Fvb7 - View
Lonicera japonica Lj8A66T49 GWHAAZE00000008 + View
Lactuca sativa Lsat_1_v5_gn_8_11680 1.14.99.33 - Delta(12)-fatty acid dehydrogenase / Linoleate Delta-12-fatty acid acetylenase (desaturase) Lsat_1_v8_lg_8 + View
Manihot esculenta Manes.10G011300 Chromosome10 + View
Prunus persica Prupe.2G251200 K10257 - omega-3 fatty acid desaturase (delta-15 desaturase) (FAD8, desB) Pp02 - View
Populus trichocarpa Potri.008G069600 K10257 - omega-3 fatty acid desaturase (delta-15 desaturase) (FAD8, desB) Chr08 - View
Rosa chinensis RcHm_v2.0_Chr1g0370421 RcHm_v2.0_Chr1 - View
Salix brachista Sabra10G0144600 GWHAAZH00000010 + View
Schrenkiella parvula Sp3g09460 K10257 - omega-3 fatty acid desaturase (delta-15 desaturase) (FAD8, desB) ch3-1 + View
Schrenkiella parvula Sp6g37280 K10257 - omega-3 fatty acid desaturase (delta-15 desaturase) (FAD8, desB) ch6-6 - View
Selenicereus undatus Hund13871 Scaffold_33679 - View
Theobroma cacao Thecc.10G015100 Fatty acid desaturase 8 Chromosome_10 + View
Tarenaya hassleriana THA.LOC104826849 temperature-sensitive sn-2 acyl-lipid omega-3 desaturase (ferredoxin)%2C chloroplastic-like isoform X2 NW_010967707.1 + View
Tarenaya hassleriana THA.LOC104816543 temperature-sensitive sn-2 acyl-lipid omega-3 desaturase (ferredoxin)%2C chloroplastic-like NW_010965775.1 + View
Vaccinium macrocarpon vmacro06961 Similar to FAD7: Omega-3 fatty acid desaturase, chloroplastic (Sesamum indicum OX%3D4182) chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01011171001 chr8 - View