Gene: Cc02_g06400
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc02_g06400
- Transcript Identifier Cc02_g06400.1
- Gene Type Coding gene
- Location chr2 : 5048174-5049958 : positive
Gene Family Information
- ID HOM05D000674
- #Genes/#Species 850/100
- Phylogenetic origin
- ID ORTHO05D001490
- #Genes/#Species 399/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- UniProtKB P48622
- UniProtKB P48619
- UniProtKB B9HHQ8
- UniProtKB F6HCC1
- UniProtKB P48620
- UniProtKB Q8LK94
- id GSCOCG00039173001
Descriptions
- Description Omega-3 fatty acid desaturase, chloroplastic
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006629 | IEA | InterPro | lipid metabolic process | |
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT3G11170 |
| GO:0009266 | ISO | PLAZA Integrative Orthology | response to temperature stimulus | AT5G05580 |
| GO:0006633 | ISO | PLAZA Integrative Orthology | fatty acid biosynthetic process | AT3G11170 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016717 | ISO | PLAZA Homology (enrichment) | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | HOM05D000674 |
| GO:0042389 | ISO | PLAZA Integrative Orthology | omega-3 fatty acid desaturase activity | AT3G11170 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G11170 |
| GO:0042170 | ISO | PLAZA Integrative Orthology | plastid membrane | AT3G11170 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT3G11170 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR005804 | Fatty acid desaturase domain |
| Mapman id | Description |
|---|---|
| 5.1.7.3 | Lipid metabolism.fatty acid biosynthesis.fatty acid desaturation.delta-12/delta-15 fatty acid desaturase (FAD2/3/6-8) |