Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaB01g05979 ChrB01 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G7140 LG-11 - View
Arabidopsis lyrata AL6G16130 scaffold_6 - View
Arabidopsis thaliana AT5G06160 splicing factor-like protein Encodes a protein with similarity to pre-mRNA splicing factor SF3a60 that is involved in gametic cell fate determination. Loss of function results in the ectopic expression of egg cell makers suggesting a role in restriction of gametic cell fate. Expressed strongly in gametophytes and weakly in sporophytes. ATROPOS (ATO)%3B FUNCTIONS IN: zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: regulation of embryo sac egg cell differentiation%3B LOCATED IN: cytosol%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C C2H2-like (InterPro:IPR015880)%2C Zinc finger%2C C2H2-type matrin (InterPro:IPR000690)%2C Splicing factor SF3a60 binding domain (InterPro:IPR021966)%3B Has 679 Blast hits to 673 proteins in 216 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 330%3B Fungi - 136%3B Plants - 106%3B Viruses - 0%3B Other Eukaryotes - 107 (source: NCBI BLink). Chr5 - View
Brassica napus C02p02610 C02 - View
Brassica napus A03p02600 A03 - View
Brassica napus C03p02940 C03 - View
Brassica oleracea BolC3t12849H C3 - View
Brassica oleracea BolC2t06227H C2 - View
Brassica rapa BraA02t04872Z A02 - View
Brassica rapa BraA03t09621Z A03 - View
Cardamine hirsuta CARHR206870 Splicing factor 3A subunit 3, putative, expressed Chr6 - View
Capsella rubella Carub.0006s0504 K12827 - splicing factor 3A subunit 3 (SF3A3, SAP61, PRP9) scaffold_6 - View
Eutrema salsugineum Thhalv10013305m.g K12827 - splicing factor 3A subunit 3 (SF3A3, SAP61, PRP9) scaffold_2 - View
Schrenkiella parvula Sp6g36730 K12827 - splicing factor 3A subunit 3 (SF3A3, SAP61, PRP9) ch6-6 + View