Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaC02g07347 ChrC02 + View
BcaB06g29122 ChrB06 + View
BcaC01g05441 ChrC01 - View
BcaB01g03593 ChrB01 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G10830 LG-10 + View
Aethionema arabicum Aa31LG5G19560 LG-5 - View
Actinidia chinensis Actinidia00939 Lachesis_group3 + View
Actinidia chinensis Actinidia13929 Lachesis_group21 + View
Arabidopsis lyrata AL4G37680 scaffold_4 + View
Avicennia marina MSTRG.8949 ScioBoG_11560_HRSCAF_11609 + View
Amaranthus hybridus Ah.16g103390 Clathrin light chain 2 AmaHy_arrow1_Scaffold_16 + View
Arabidopsis thaliana AT2G40060 Clathrin light chain protein Encodes a clathrin that is localized to the cortical division zone and the cell plate and colocalizes with TPLATE during cell plate anchoring. Clathrin light chain protein%3B FUNCTIONS IN: structural molecule activity%3B INVOLVED IN: intracellular protein transport%2C vesicle-mediated transport%3B LOCATED IN: plasma membrane%2C chloroplast envelope%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Clathrin light chain (InterPro:IPR000996)%3B BEST Arabidopsis thaliana protein match is: Clathrin light chain protein (TAIR:AT3G51890.1)%3B Has 548 Blast hits to 536 proteins in 149 species: Archae - 2%3B Bacteria - 80%3B Metazoa - 210%3B Fungi - 41%3B Plants - 105%3B Viruses - 2%3B Other Eukaryotes - 108 (source: NCBI BLink). Chr2 + View
Brassica napus C04p67750 C04 + View
Brassica napus A05p06410 A05 - View
Brassica napus C03p26650 C03 + View
Brassica napus C04p07420 C04 - View
Brassica napus A03p22500 A03 + View
Brassica napus A04p30120 A04 - View
Brassica oleracea BolC4t28278H C4 + View
Brassica oleracea BolC3t15050H C3 + View
Brassica oleracea BolC4t22363H C4 - View
Brassica rapa BraA04t18496Z A04 + View
Brassica rapa BraA05t19609Z A05 - View
Beta vulgaris EL10Ac2g04812 PTHR10639:SF10 - CLATHRIN LIGHT CHAIN 2 Chr2_EL10_PGA_scaffold6 + View
Camellia sinensis var. sinensis CSS0028641 unnamed protein product [Coffea canephora] Chr1 + View
Corylus avellana Haze_17212 Similar to CLC2: Clathrin light chain 2 (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc02_g06670 Putative Clathrin light chain 3 chr2 - View
Citrus clementina Ciclev10032499m.g scaffold_4 + View
Carpinus fangiana Cfa001333 Cfa01 - View
Cardamine hirsuta CARHR135000 Clathrin light chain protein Chr4 + View
Carya illinoinensis CiPaw.02G191400 PTHR10639//PTHR10639:SF10 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN 2 Chr02 + View
Citrullus lanatus ClCG04G007110 Clathrin light chain protein CG_Chr04 + View
Carica papaya Cpa.g.sc19.191 supercontig_19 - View
Chenopodium quinoa AUR62012233 CLC2: Clathrin light chain 2 C_Quinoa_Scaffold_1995 + View
Chenopodium quinoa AUR62022865 CLC2: Clathrin light chain 2 C_Quinoa_Scaffold_3378 + View
Capsella rubella Carub.0004s2220 PTHR10639//PTHR10639:SF10 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN 2 scaffold_4 + View
Davidia involucrata Dinv34397 GWHABJS00000009 + View
Davidia involucrata Dinv17979 GWHABJS00000004 + View
Durio zibethinus Duzib128G1291 NW_019168481.1 + View
Durio zibethinus Duzib106G0183 NW_019168492.1 - View
Durio zibethinus Duzib128G1186 NW_019168481.1 - View
Durio zibethinus Duzib106G1760 NW_019168492.1 + View
Eucalyptus grandis Eucgr.J00233 Chr10 - View
Eutrema salsugineum Thhalv10017117m.g PTHR10639:SF10 - CLATHRIN LIGHT CHAIN 2 scaffold_10 + View
Fragaria x ananassa FAN03G2445 PTHR10639//PTHR10639:SF10 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN 2 Fvb7-3 + View
Fragaria vesca FvH4_7g24260 PTHR10639//PTHR10639:SF10 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN 2 Fvb7 - View
Gossypium hirsutum Gohir.A05G329200 PTHR10639//PTHR10639:SF10 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN 2 A05 + View
Gossypium hirsutum Gohir.D04G067300 PTHR10639//PTHR10639:SF10 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN 2 D04 + View
Gossypium raimondii Gorai.012G076300 Chr12 + View
Lonicera japonica Lj8C68T16 GWHAAZE00000008 - View
Malus domestica MD07G1216800 Clathrin light chain protein Chr07 + View
Malus domestica MD01G1150700 Clathrin light chain protein Chr01 + View
Manihot esculenta Manes.07G128200 Chromosome07 + View
Manihot esculenta Manes.10G014100 Chromosome10 - View
Petunia axillaris Peaxi162Scf00825g00018 Clathrin light chain protein Peaxi162Scf00825 + View
Prunus persica Prupe.2G248500 PTHR10639:SF10 - CLATHRIN LIGHT CHAIN 2 Pp02 + View
Populus trichocarpa Potri.010G190400 PTHR10639//PTHR10639:SF10 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN 2 Chr10 - View
Populus trichocarpa Potri.008G066800 PTHR10639//PTHR10639:SF10 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN 2 Chr08 + View
Quercus lobata QL08p062857 8 - View
Rhododendron simsii Rhsim09G0176600 chr09 + View
Striga asiatica SGA_v2.0_scaffold60G20990 scaffold60 + View
Salix brachista Sabra10G0146800 GWHAAZH00000010 - View
Simmondsia chinensis Sc11g0007170 GWHAASQ00000011 + View
Schrenkiella parvula Sp4g22350 KOG4031 - Vesicle coat protein clathrin, light chain ch4-6 + View
Selenicereus undatus Hund15951 Scaffold_33677 - View
Trochodendron aralioides TAR369G0741 group18 - View
Theobroma cacao Thecc.10G020800 Clathrin light chain protein Chromosome_10 - View
Tarenaya hassleriana THA.LOC104810338 clathrin light chain 2 NW_010960187.1 + View
Tarenaya hassleriana THA.LOC104823382 clathrin light chain 3 NW_010966881.1 - View
Tarenaya hassleriana THA.LOC104810085 clathrin light chain 2-like NW_010965122.1 + View
Tripterygium wilfordii TWI09G1493 NC_052245.1 - View
Vaccinium macrocarpon vmacro10053 Similar to CLC2: Clathrin light chain 2 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01032845001 chr13 + View