Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaC09g49776 ChrC09 - View
BcaC01g01881 ChrC01 + View
BcaC03g14036 ChrC03 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G15780 LG-4 - View
Aethionema arabicum Aa31LG1G12020 LG-1 - View
Acer truncatum Atru.chr3.4023 chr3 - View
Actinidia chinensis Actinidia34433 Lachesis_group15 + View
Arabidopsis lyrata AL5G25840 scaffold_5 - View
Amaranthus hybridus Ah.10g037180 Ras-related protein Rab2BV AmaHy_arrow1_Scaffold_10 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.IT56S1 K07904 - Ras-related protein Rab-11A (RAB11A) arahy.Tifrunner.gnm1.Arahy.03 - View
Arabidopsis thaliana AT5G59150 RAB GTPase homolog A2D RAB GTPase homolog A2D (RABA2D)%3B FUNCTIONS IN: GTP binding%3B INVOLVED IN: protein transport%2C small GTPase mediated signal transduction%3B LOCATED IN: endosome%2C plasma membrane%2C cell plate%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806)%2C Small GTP-binding protein (InterPro:IPR005225)%2C Small GTPase (InterPro:IPR020851)%2C Ras (InterPro:IPR013753)%2C Ras small GTPase%2C Rab type (InterPro:IPR003579)%2C Rab11-related (InterPro:IPR015595)%3B BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A2C (TAIR:AT3G46830.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT1G07410 RAB GTPase homolog A2B RAB GTPase homolog A2B (RABA2b)%3B FUNCTIONS IN: GTP binding%2C GTPase activity%3B INVOLVED IN: intracellular protein transport%2C signal transduction%2C nucleocytoplasmic transport%2C protein transport%2C small GTPase mediated signal transduction%3B LOCATED IN: endosome%2C plasma membrane%2C cell plate%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Ran GTPase (InterPro:IPR002041)%2C ADP-ribosylation factor (InterPro:IPR006688)%2C Ras (InterPro:IPR013753)%2C Ras small GTPase%2C Ras type (InterPro:IPR003577)%2C Rab11-related (InterPro:IPR015595)%2C Small GTPase%2C Rho type (InterPro:IPR003578)%2C Ras GTPase (InterPro:IPR001806)%2C Small GTP-binding protein (InterPro:IPR005225)%2C Small GTPase (InterPro:IPR020851)%2C Ras small GTPase%2C Rab type (InterPro:IPR003579)%3B BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A2D (TAIR:AT5G59150.1)%3B Has 28965 Blast hits to 28914 proteins in 772 species: Archae - 29%3B Bacteria - 152%3B Metazoa - 15139%3B Fungi - 4328%3B Plants - 3313%3B Viruses - 20%3B Other Eukaryotes - 5984 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT3G46830 RAB GTPase homolog A2C RAB GTPase homolog A2C (RABA2c)%3B FUNCTIONS IN: GTP binding%3B INVOLVED IN: protein transport%2C small GTPase mediated signal transduction%3B LOCATED IN: endosome%2C plasma membrane%2C cell plate%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806)%2C Small GTP-binding protein (InterPro:IPR005225)%2C Small GTPase (InterPro:IPR020851)%2C Ras (InterPro:IPR013753)%2C Ras small GTPase%2C Rab type (InterPro:IPR003579)%2C Rab11-related (InterPro:IPR015595)%3B BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A2D (TAIR:AT5G59150.1)%3B Has 28770 Blast hits to 28717 proteins in 774 species: Archae - 26%3B Bacteria - 141%3B Metazoa - 14934%3B Fungi - 4337%3B Plants - 3364%3B Viruses - 20%3B Other Eukaryotes - 5948 (source: NCBI BLink). Chr3 - View
Brassica napus C01p33060 C01 + View
Brassica napus C03p70980 C03 - View
Brassica napus A06p20710 A06 + View
Brassica napus A01p26000 A01 + View
Brassica oleracea BolC1t03246H C1 + View
Brassica oleracea BolC3t19377H C3 - View
Brassica rapa BraA02t05812Z A02 + View
Brassica rapa BraA06t25149Z A06 + View
Beta vulgaris EL10Ac7g16085 K07904 - Ras-related protein Rab-11A (RAB11A) Chr7_EL10_PGA_scaffold5 - View
Capsicum annuum CAN.G394.81 PGAv.1.6.scaffold394 - View
Cannabis sativa CANSAT54G0759 NC_044375.1 + View
Cicer arietinum L. Ca_20612_v3 Ca_LG6_v3 + View
Carya illinoinensis CiPaw.14G063900 K07904 - Ras-related protein Rab-11A (RAB11A) Chr14 + View
Carya illinoinensis CiPaw.02G187800 K07904 - Ras-related protein Rab-11A (RAB11A) Chr02 - View
Carya illinoinensis CiPaw.13G087600 K07904 - Ras-related protein Rab-11A (RAB11A) Chr13 + View
Cucumis melo MELO3C025885.2 ras-related protein Rab11C chr11 - View
Capsella rubella Carub.0005s1306 PTHR24073//PTHR24073:SF582 - FAMILY NOT NAMED // P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN-RELATED scaffold_5 - View
Daucus carota DCAR_005930 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv43006 GWHABJS00000085 - View
Davidia involucrata Dinv34303 GWHABJS00000007 - View
Davidia involucrata Dinv16272 GWHABJS00000004 + View
Davidia involucrata Dinv43091 GWHABJS00000085 + View
Durio zibethinus Duzib170G0942 NW_019167871.1 + View
Durio zibethinus Duzib106G0186 NW_019168492.1 + View
Durio zibethinus Duzib150G1430 NW_019167882.1 - View
Erigeron canadensis ECA233G3970 Conyza_canadensis_scaffold:1 + View
Erigeron canadensis ECA236G0751 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.B02298 Chr02 + View
Eucalyptus grandis Eucgr.J01998 Chr10 + View
Eutrema salsugineum Thhalv10002662m.g PTHR24073:SF582 - P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN-RELATED scaffold_4 + View
Eutrema salsugineum Thhalv10014634m.g K07904 - Ras-related protein Rab-11A (RAB11A) scaffold_2 + View
Fragaria x ananassa FAN25G3434 K07904 - Ras-related protein Rab-11A (RAB11A) Fvb3-1 + View
Fragaria x ananassa FAN21G3111 KOG0087 - GTPase Rab11/YPT3, small G protein superfamily Fvb3-2 - View
Gossypium hirsutum Gohir.D05G093100 K07904 - Ras-related protein Rab-11A (RAB11A) D05 + View
Gossypium hirsutum Gohir.A05G092300 K07904 - Ras-related protein Rab-11A (RAB11A) A05 + View
Gossypium hirsutum Gohir.A07G101000 K07904 - Ras-related protein Rab-11A (RAB11A) A07 - View
Gossypium hirsutum Gohir.D07G105100 K07904 - Ras-related protein Rab-11A (RAB11A) D07 - View
Gossypium hirsutum Gohir.D03G121100 PF00025//PF08477 - ADP-ribosylation factor family (Arf) // Ras of Complex, Roc, domain of DAPkinase (Roc) D03 + View
Gossypium raimondii Gorai.001G113000 Chr01 - View
Gossypium raimondii Gorai.009G095700 Chr09 + View
Gossypium raimondii Gorai.011G271400 Chr11 - View
Helianthus annuus HanXRQChr01g0010701 Putative small GTPase superfamily; Ran GTPase; P-loop containing nucleoside triphosphate hydrolase HanXRQChr01 - View
Helianthus annuus HanXRQChr07g0201791 Putative small GTPase superfamily; Ran GTPase; P-loop containing nucleoside triphosphate hydrolase HanXRQChr07 - View
Lupinus albus Lalb_Chr18g0052951 K07904 - Ras-related protein Rab-11A (RAB11A) Lalb_Chr18 + View
Lactuca sativa Lsat_1_v5_gn_5_169821 Lsat_1_v8_lg_5 + View
Manihot esculenta Manes.02G126900 Chromosome02 + View
Nicotiana tabacum Nitab4.5_0000102g0440 Small GTPase superfamily, Rho type, Ran GTPase, P-loop containing nucleoside triphosphate hydrolase, Small GTPase superfamily, Small GTPase superfamily, ARF type, Small GTPase superfamily, Rab type, Small GTP-binding protein domain, Small GTPase superfamily, Ras type Nitab4.5_0000102 - View
Olea europaea Oeu002452.1 chr12 + View
Punica granatum PGR119G0168 NC_045132.1 - View
Punica granatum PGR102G3298 NC_045129.1 + View
Rhododendron simsii Rhsim01G0233100 chr01 - View
Simmondsia chinensis Sc21g0006080 GWHAASQ00000021 - View
Simmondsia chinensis Sc12g0001160 GWHAASQ00000012 + View
Solanum lycopersicum Solyc05g054150.3 Ras-related protein RABA5a (AHRD V3.3 *** A0A1U8F693_CAPAN) SL4.0ch05 + View
Solanum lycopersicum Solyc06g076450.3 Ras-related protein RABA2c (AHRD V3.3 *** A0A1U8H2Q8_CAPAN) SL4.0ch06 - View
Schrenkiella parvula Sp5g14900 PTHR24073//PTHR24073:SF582 - FAMILY NOT NAMED // P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN-RELATED ch5-1 + View
Solanum pennellii Sopen06g032860 Ras-related protein Rab2BV - Beta vulgaris (Sugar beet), RAB GTPase homolog A2B (RABA2b) | FUNCTIONS IN: GTP binding, GTPase activity | INVOLVED IN: intracellular protein transport, signal transduction, nucleocytoplasmic transport, protein transport, small GTPase mediated signal transduction | LOCATED IN: endosome, plasma membrane, cell plate | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 7 growth stages | CONTAINS InterPro DOMAIN/s: Ran GTPase , ADP-ribosylation factor , Ras , Ras small GTPase, Ras type , Rab11-related , Small GTPase, Rho type , Ras GTPase , Small GTP-binding protein , Small GTPase , Ras small GTPase, Rab type | BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A2D Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG400030425 RabA2 ST4.03ch06 - View
Solanum tuberosum PGSC0003DMG400020828 RabA2 ST4.03ch06 + View
Selenicereus undatus Hund04910 Scaffold_19641 + View
Selenicereus undatus Hund18880 Scaffold_33675 + View
Tarenaya hassleriana THA.LOC104799423 ras-related protein RABA2d NW_010968505.1 + View
Tarenaya hassleriana THA.LOC104814890 ras-related protein RABA2c-like NW_010965541.1 - View
Tarenaya hassleriana THA.LOC104810747 ras-related protein RABA2d-like NW_010965304.1 + View
Tripterygium wilfordii TWI31G0378 NC_052233.1 + View
Tripterygium wilfordii TWI75G0402 NC_052253.1 + View