Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Ah.02g113330 AmaHy_arrow1_Scaffold_2 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr9.2279 chr9 + View
Actinidia chinensis Actinidia06085 Lachesis_group11 - View
Actinidia chinensis Actinidia19044 Lachesis_group9 - View
Actinidia chinensis Actinidia36016 Lachesis_group4 - View
Actinidia chinensis Actinidia34990 Lachesis_group2 - View
Avicennia marina MSTRG.7811 ScioBoG_102841_HRSCAF_103114 + View
Avicennia marina MSTRG.690 ScioBoG_102831_HRSCAF_103044 - View
Avicennia marina MSTRG.13413 ScioBoG_18778_HRSCAF_18863 - View
Arabidopsis thaliana AT5G39850 Ribosomal protein S4 Ribosomal protein S4%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: cytosolic small ribosomal subunit%2C membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 (InterPro:IPR001912)%2C Ribosomal protein S4%2C conserved site (InterPro:IPR018079)%2C Ribosomal protein S4/S9%2C eukaryotic/archaeal (InterPro:IPR005710)%2C RNA-binding S4 (InterPro:IPR002942)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (TAIR:AT5G15200.1)%3B Has 6814 Blast hits to 6810 proteins in 3349 species: Archae - 264%3B Bacteria - 730%3B Metazoa - 422%3B Fungi - 285%3B Plants - 4172%3B Viruses - 0%3B Other Eukaryotes - 941 (source: NCBI BLink). Chr5 + View
Beta vulgaris EL10Ac5g10978 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Chr5_EL10_PGA_scaffold2 - View
Camellia sinensis var. sinensis CSS0015191 PREDICTED: 40S ribosomal protein S9-2 [Phoenix dactylifera] Chr12 - View
Camellia sinensis var. sinensis CSS0009916 PREDICTED: 40S ribosomal protein S9-2 [Nelumbo nucifera] Chr2 + View
Cannabis sativa CANSAT80G1894 NC_044372.1 + View
Cicer arietinum L. Ca_21833_v3 Ca_LG7_v3 + View
Corylus avellana Haze_14551 Similar to RPS9C: 40S ribosomal protein S9-2 (Arabidopsis thaliana OX%3D3702) 5 + View
Corylus avellana Haze_07344 Similar to RPS9C: 40S ribosomal protein S9-2 (Arabidopsis thaliana OX%3D3702) 4 + View
Coffea canephora Cc11_g13230 40S ribosomal protein S9-2 chr11 + View
Coffea canephora Cc07_g03270 40S ribosomal protein S9-2 chr7 - View
Carya illinoinensis CiPaw.06G083200 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Chr06 - View
Carya illinoinensis CiPaw.05G137300 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Chr05 + View
Carya illinoinensis CiPaw.11G042400 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Chr11 - View
Citrullus lanatus ClCG05G024390 40S ribosomal protein S9, putative CG_Chr05 + View
Cucumis melo MELO3C012084.2 40S ribosomal protein S9, putative chr10 + View
Cucumis sativus L. CsaV3_5G032570 40S ribosomal protein S9, putative chr5 - View
Davidia involucrata Dinv34169 GWHABJS00000008 + View
Davidia involucrata Dinv19942 GWHABJS00000006 + View
Davidia involucrata Dinv38689 GWHABJS00000019 + View
Davidia involucrata Dinv33747 GWHABJS00000014 - View
Durio zibethinus Duzib068G1197 NW_019167838.1 - View
Durio zibethinus Duzib264G1212 NW_019167960.1 - View
Durio zibethinus Duzib187G0770 NW_019167860.1 - View
Durio zibethinus Duzib147G0152 NW_019168470.1 + View
Durio zibethinus Duzib084G0980 NW_019167827.1 - View
Erigeron canadensis ECA246G4029 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.K02467 Chr11 - View
Eucalyptus grandis Eucgr.B00467 Chr02 - View
Erythranthe guttata Migut.L01311 scaffold_12 + View
Fragaria x ananassa FAN05G5567 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Fvb6-3 - View
Fragaria x ananassa FAN13G0214 PTHR11831//PTHR11831:SF11 - 30S 40S RIBOSOMAL PROTEIN // SUBFAMILY NOT NAMED Fvb5-2 + View
Fragaria x ananassa FAN08G3277 PTHR11831//PTHR11831:SF11 - 30S 40S RIBOSOMAL PROTEIN // SUBFAMILY NOT NAMED Fvb5-3 - View
Fragaria x ananassa FAN18G1251 PTHR11831//PTHR11831:SF11 - 30S 40S RIBOSOMAL PROTEIN // SUBFAMILY NOT NAMED Fvb5-1 + View
Fragaria vesca FvH4_5g15210 PTHR11831//PTHR11831:SF11 - 30S 40S RIBOSOMAL PROTEIN // SUBFAMILY NOT NAMED Fvb5 + View
Gossypium hirsutum Gohir.A05G365200 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) A05 - View
Gossypium hirsutum Gohir.A11G030431 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) A11 - View
Gossypium hirsutum Gohir.D11G033700 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) D11 - View
Glycine max Glyma.05G028000 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Gm05 + View
Glycine max Glyma.04G171400 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Gm04 + View
Glycine max Glyma.06G192500 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Gm06 - View
Glycine max Glyma.17G098600 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Gm17 - View
Gossypium raimondii Gorai.012G055000 Chr12 + View
Gossypium raimondii Gorai.007G036500 Chr07 - View
Lupinus albus Lalb_Chr12g0196801 PTHR11831//PTHR11831:SF13 - 30S 40S RIBOSOMAL PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr12 - View
Lupinus albus Lalb_Chr07g0177951 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Lalb_Chr07 - View
Lupinus albus Lalb_Chr13g0303311 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Lalb_Chr13 + View
Lotus japonicus Lj1g0028039 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) chr1 - View
Lotus japonicus Lj4g0011848 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) chr4 - View
Lonicera japonica Lj3C1039T6 GWHAAZE00000003 + View
Lactuca sativa Lsat_1_v5_gn_4_9960 Lsat_1_v8_lg_4 - View
Malus domestica MD17G1049900 Ribosomal protein S4 Chr17 - View
Malus domestica MD14G1197700 Ribosomal protein S4 Chr14 - View
Malus domestica MD06G1191100 Ribosomal protein S4 Chr06 - View
Manihot esculenta Manes.06G094400 Chromosome06 + View
Manihot esculenta Manes.01G187300 Chromosome01 + View
Medicago truncatula Medtr4g108305 40S ribosomal protein S9, putative chr4 - View
Nelumbo nucifera Nn3g17195 chr3 - View
Nicotiana tabacum Nitab4.5_0000141g0280 RNA-binding S4 domain, Ribosomal protein S4/S9, eukaryotic/archaeal, Ribosomal protein S4/S9, Ribosomal protein S4, conserved site, Ribosomal protein S4/S9, N-terminal Nitab4.5_0000141 + View
Punica granatum PGR044G0780 NC_045134.1 + View
Punica granatum PGR083G2049 NC_045133.1 - View
Prunus persica Prupe.5G189800 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Pp05 - View
Papaver somniferum PSO478G2731 NC_039361.1 + View
Phaseolus vulgaris Phvul.003G191200 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Chr03 + View
Phaseolus vulgaris Phvul.009G188600 K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Chr09 + View
Quercus lobata QL10p016435 10 - View
Quercus lobata QL02p081559 CM012294 - View
Quercus lobata QL03p064711 3 + View
Rosa chinensis RcHm_v2.0_Chr7g0180961 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim12G0157300 chr12 + View
Simmondsia chinensis Sc04g0008270 GWHAASQ00000004 + View
Simmondsia chinensis Sc10g0009930 GWHAASQ00000010 + View
Sechium edule Sed0006209 LG06 + View
Solanum pennellii Sopen05g003210 Ribosomal protein S4 | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation | LOCATED IN: cytosolic small ribosomal subunit, membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 , Ribosomal protein S4, conserved site , Ribosomal protein S4/S9, eukaryotic/archaeal , RNA-binding S4 | BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 Spenn-ch05 - View
Solanum tuberosum PGSC0003DMG400023058 40S ribosomal protein S9 ST4.03ch05 + View
Selenicereus undatus Hund05894 Scaffold_19641 + View
Selenicereus undatus Hund25255 Scaffold_3410 + View
Trochodendron aralioides TAR371G0018 group13 - View
Trochodendron aralioides TAR629G0370 group0 + View
Theobroma cacao Thecc.03G083800 Ribosomal protein S4 Chromosome_3 - View
Theobroma cacao Thecc.04G079700 Ribosomal protein S4 Chromosome_4 - View
Trifolium pratense TPR.G34736 Tp57577_TGAC_v2_scaf_629 + View
Trifolium pratense TPR.G11849 Tp57577_TGAC_v2_LG3 + View
Tripterygium wilfordii TWI60G1632 NC_052246.1 - View
Tripterygium wilfordii TWI34G0562 NC_052235.1 + View
Tripterygium wilfordii TWI32G0917 NC_052254.1 - View
Vigna mungo VMungo1215G1037 CM024074.1 - View
Vigna mungo VMungo1309G2077 CM024072.1 - View
Vitis vinifera GSVIVG01008028001 chr17 - View
Vitis vinifera GSVIVG01020020001 chr1 - View
Vitis vinifera GSVIVG01011384001 chr14 - View