Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Ah.02g114150 AmaHy_arrow1_Scaffold_2 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G18470 LG-3 - View
Aethionema arabicum Aa31LG5G12680 LG-5 + View
Aethionema arabicum Aa31LG11G2320 LG-11 + View
Acer truncatum Atru.chr9.545 chr9 - View
Actinidia chinensis Actinidia35041 Lachesis_group2 + View
Actinidia chinensis Actinidia17588 Lachesis_group21 + View
Arabidopsis lyrata AL8G37610 scaffold_8 - View
Arabidopsis lyrata AL6G18440 scaffold_6 + View
Arabidopsis lyrata AL3G11400 scaffold_3 + View
Avicennia marina MSTRG.9597 ScioBoG_12795_HRSCAF_12848 - View
Avicennia marina MSTRG.4484 ScioBoG_102837_HRSCAF_103074 + View
Avicennia marina MSTRG.23881 ScioBoG_3895_HRSCAF_3912 - View
Aquilegia oxysepala Aqoxy3G03676 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.U9727D PTHR31072:SF24 - TRANSCRIPTION FACTOR TCP17-RELATED arahy.Tifrunner.gnm1.Arahy.10 - View
Arabidopsis thaliana AT5G08070 TCP domain protein 17 TCP gene involved in heterochronic control of leaf differentiation. TCP domain protein 17 (TCP17)%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C TCP (InterPro:IPR005333)%2C Transcription factor TCP subgroup (InterPro:IPR017887)%3B BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1%2C cycloidea and PCF transcription factor 5 (TAIR:AT5G60970.1)%3B Has 1349 Blast hits to 1349 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 1349%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT5G60970 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 TCP gene involved in heterochronic control of leaf differentiation. TEOSINTE BRANCHED 1%2C cycloidea and PCF transcription factor 5 (TCP5)%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C TCP (InterPro:IPR005333)%2C Transcription factor TCP subgroup (InterPro:IPR017887)%3B BEST Arabidopsis thaliana protein match is: TCP domain protein 17 (TAIR:AT5G08070.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT3G02150 plastid transcription factor 1 a chloroplast trans-acting factor of the psbD light-responsive promoter.TCP gene involved in heterochronic control of leaf differentiation. plastid transcription factor 1 (PTF1)%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: cell differentiation%2C positive regulation of development%2C heterochronic%2C regulation of transcription%2C leaf morphogenesis%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C TCP (InterPro:IPR005333)%2C Transcription factor TCP subgroup (InterPro:IPR017887)%3B BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1%2C cycloidea and PCF transcription factor 5 (TAIR:AT5G60970.1)%3B Has 1398 Blast hits to 1398 proteins in 300 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 18%3B Fungi - 2%3B Plants - 1368%3B Viruses - 0%3B Other Eukaryotes - 10 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaC06g33187 ChrC06 + View
Brassica carinata BcaC05g30328 ChrC05 + View
Brassica napus A03p46680 A03 - View
Brassica napus C07p44740 C07 - View
Brassica oleracea BolC7t44997H C7 - View
Brassica rapa BraA03t13791Z A03 - View
Beta vulgaris EL10Ac5g11150 PTHR31072:SF5 - TRANSCRIPTION FACTOR TCP13 Chr5_EL10_PGA_scaffold2 - View
Camellia sinensis var. sinensis CSS0001744 PREDICTED: transcription factor TCP5 [Vitis vinifera] Chr2 - View
Camellia sinensis var. sinensis CSS0034115 Plastid transcription factor 1, putative isoform 1 [Theobroma cacao] Chr2 + View
Camellia sinensis var. sinensis CSS0027512 PREDICTED: transcription factor TCP5 [Vitis vinifera] Chr15 + View
Capsicum annuum CAN.G1228.15 PGAv.1.6.scaffold1228 - View
Cannabis sativa CANSAT64G1907 NC_044379.1 - View
Corylus avellana Haze_14421 Similar to TCP13: Transcription factor TCP13 (Arabidopsis thaliana OX%3D3702) 5 - View
Corylus avellana Haze_07740 Similar to TCP5: Transcription factor TCP5 (Arabidopsis thaliana OX%3D3702) 4 + View
Coffea canephora Cc07_g04300 Putative uncharacterized protein chr7 + View
Citrus clementina Ciclev10020626m.g scaffold_3 + View
Ceratophyllum demersum CDE06G2374 4 - View
Ceratophyllum demersum CDE04G0035 2 - View
Carpinus fangiana Cfa019349 Cfa08 + View
Cardamine hirsuta CARHR205110 TCP transcription factor 5 Chr6 - View
Cardamine hirsuta CARHR076120 TCP transcription factor 4 Chr3 + View
Cardamine hirsuta CARHR274660 TCP family transcription factor containing protein Chr8 - View
Carya illinoinensis CiPaw.12G009000 PTHR31072:SF24 - TRANSCRIPTION FACTOR TCP17-RELATED Chr12 + View
Carya illinoinensis CiPaw.04G054700 PTHR31072//PTHR31072:SF5 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP13 Chr04 - View
Carya illinoinensis CiPaw.11G054900 PTHR31072//PTHR31072:SF24 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP17-RELATED Chr11 + View
Citrullus lanatus ClCG04G011720 TCP family transcription factor containing protein CG_Chr04 - View
Citrullus lanatus ClCG06G015580 TCP family transcription factor containing protein CG_Chr06 - View
Cucumis melo MELO3C017230.2 transcription factor TCP5 chr02 - View
Cucumis melo MELO3C002038.2 transcription factor TCP5 chr12 - View
Chenopodium quinoa AUR62021540 TCP5: Transcription factor TCP5 C_Quinoa_Scaffold_1675 - View
Chenopodium quinoa AUR62008552 TCP5: Transcription factor TCP5 C_Quinoa_Scaffold_3422 + View
Capsella rubella Carub.0008s2166 PTHR31072:SF24 - TRANSCRIPTION FACTOR TCP17-RELATED scaffold_8 - View
Capsella rubella Carub.0006s0696 PTHR31072:SF24 - TRANSCRIPTION FACTOR TCP17-RELATED scaffold_6 + View
Capsella rubella Carub.0003s0127 PTHR31072:SF5 - TRANSCRIPTION FACTOR TCP13 scaffold_3 + View
Cucumis sativus L. CsaV3_1G006070 transcription factor TCP5 chr1 + View
Cucumis sativus L. CsaV3_1G003610 transcription factor DICHOTOMA-like chr1 + View
Daucus carota DCAR_025437 hypothetical protein DCARv2_Chr7 + View
Davidia involucrata Dinv33834 GWHABJS00000014 + View
Durio zibethinus Duzib264G0963 The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon NW_019167960.1 + View
Durio zibethinus Duzib205G0744 NW_019168381.1 + View
Durio zibethinus Duzib147G0310 NW_019168470.1 - View
Durio zibethinus Duzib068G0919 NW_019167838.1 + View
Erigeron canadensis ECA232G0975 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA246G3164 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.I02038 Chr09 + View
Eucalyptus grandis Eucgr.K02535 Chr11 + View
Eucalyptus grandis Eucgr.B00608 Chr02 + View
Erythranthe guttata Migut.H00617 scaffold_8 - View
Erythranthe guttata Migut.D01635 scaffold_4 - View
Eutrema salsugineum Thhalv10021021m.g scaffold_13 - View
Eutrema salsugineum Thhalv10004440m.g PTHR31072:SF24 - TRANSCRIPTION FACTOR TCP17-RELATED scaffold_6 + View
Eutrema salsugineum Thhalv10014467m.g PTHR31072:SF24 - TRANSCRIPTION FACTOR TCP17-RELATED scaffold_2 + View
Fragaria x ananassa FAN18G0306 PTHR31072:SF24 - TRANSCRIPTION FACTOR TCP17-RELATED Fvb5-1 - View
Fragaria x ananassa FAN13G1180 PTHR31072:SF24 - TRANSCRIPTION FACTOR TCP17-RELATED Fvb5-2 - View
Fragaria vesca FvH4_5g13710 PTHR31072//PTHR31072:SF24 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP17-RELATED Fvb5 - View
Fragaria vesca FvH4_6g46730 PTHR31072:SF5 - TRANSCRIPTION FACTOR TCP13 Fvb6 - View
Gossypium hirsutum Gohir.A07G067900 PTHR31072:SF24 - TRANSCRIPTION FACTOR TCP17-RELATED A07 - View
Gossypium hirsutum Gohir.D07G072500 PTHR31072:SF24 - TRANSCRIPTION FACTOR TCP17-RELATED D07 - View
Gossypium hirsutum Gohir.D12G186300 PTHR31072:SF24 - TRANSCRIPTION FACTOR TCP17-RELATED D12 + View
Gossypium hirsutum Gohir.A12G183300 PTHR31072:SF24 - TRANSCRIPTION FACTOR TCP17-RELATED A12 + View
Glycine max Glyma.05G019900 PTHR31072:SF24 - TRANSCRIPTION FACTOR TCP17-RELATED Gm05 - View
Glycine max Glyma.06G204300 PTHR31072:SF24 - TRANSCRIPTION FACTOR TCP17-RELATED Gm06 + View
Glycine max Glyma.18G268700 PTHR31072:SF5 - TRANSCRIPTION FACTOR TCP13 Gm18 + View
Glycine max Glyma.08G247300 PTHR31072:SF5 - TRANSCRIPTION FACTOR TCP13 Gm08 + View
Glycine max Glyma.17G079900 PTHR31072:SF24 - TRANSCRIPTION FACTOR TCP17-RELATED Gm17 + View
Gossypium raimondii Gorai.008G199700 Chr08 + View
Gossypium raimondii Gorai.012G048500 Chr12 - View
Gossypium raimondii Gorai.001G076700 Chr01 - View
Lupinus albus Lalb_Chr02g0158891 PTHR31072:SF5 - TRANSCRIPTION FACTOR TCP13 Lalb_Chr02 - View
Lupinus albus Lalb_Chr12g0197261 PTHR31072//PTHR31072:SF24 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP17-RELATED Lalb_Chr12 + View
Lupinus albus Lalb_Chr13g0302791 PTHR31072//PTHR31072:SF24 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP17-RELATED Lalb_Chr13 - View
Lotus japonicus Lj1g0002593 PTHR31072:SF24 - TRANSCRIPTION FACTOR TCP17-RELATED chr1 - View
Lotus japonicus Lj1g0010350 PTHR31072:SF5 - TRANSCRIPTION FACTOR TCP13 chr1 - View
Lotus japonicus Lj4g0003036 PTHR31072:SF24 - TRANSCRIPTION FACTOR TCP17-RELATED chr4 - View
Lonicera japonica Lj9P440T28 GWHAAZE00000009 - View
Lactuca sativa Lsat_1_v5_gn_3_97300 PTHR31072:SF5 - TRANSCRIPTION FACTOR TCP13 Lsat_1_v8_lg_3 + View
Lactuca sativa Lsat_1_v5_gn_4_110881 Lsat_1_v8_lg_4 + View
Malus domestica MD17G1061100 plastid transcription factor 1 Chr17 + View
Malus domestica MD14G1213400 TEOSINTE BRANCHED 1 Chr14 + View
Manihot esculenta Manes.06G083400 Chromosome06 - View
Manihot esculenta Manes.14G086500 Chromosome14 + View
Medicago truncatula Medtr4g109660 TCP family transcription factor chr4 + View
Medicago truncatula Medtr3g026050 TCP family transcription factor chr3 + View
Nelumbo nucifera Nn4g23449 chr4 + View
Nelumbo nucifera Nn3g17467 chr3 + View
Oryza sativa ssp. japonica Os01g0763200 TCP family transcription factor, Strigolactone and cytokinin controlled mesocotyl elongation in darkness chr01 - View
Petunia axillaris Peaxi162Scf00166g00045 plastid transcription factor 1 Peaxi162Scf00166 - View
Petunia axillaris Peaxi162Scf00201g00037 plastid transcription factor 1 Peaxi162Scf00201 + View
Petunia axillaris Peaxi162Scf00013g00072 plastid transcription factor 1 Peaxi162Scf00013 + View
Punica granatum PGR083G2811 NC_045133.1 + View
Punica granatum PGR004G1208 NC_045131.1 - View
Punica granatum PGR044G1805 NC_045134.1 - View
Prunus persica Prupe.5G206400 PTHR31072:SF24 - TRANSCRIPTION FACTOR TCP17-RELATED Pp05 + View
Prunus persica Prupe.3G252600 PTHR31072:SF5 - TRANSCRIPTION FACTOR TCP13 Pp03 - View
Populus trichocarpa Potri.017G094800 PTHR31072:SF5 - TRANSCRIPTION FACTOR TCP13 Chr17 + View
Populus trichocarpa Potri.015G058800 PTHR31072:SF24 - TRANSCRIPTION FACTOR TCP17-RELATED Chr15 + View
Phaseolus vulgaris Phvul.003G183700 PTHR31072:SF24 - TRANSCRIPTION FACTOR TCP17-RELATED Chr03 - View
Phaseolus vulgaris Phvul.008G031740 PTHR31072:SF5 - TRANSCRIPTION FACTOR TCP13 Chr08 - View
Quercus lobata QL10p019856 10 + View
Quercus lobata QL02p067433 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr7g0183231 RcHm_v2.0_Chr7 + View
Rhododendron simsii Rhsim08G0075300 chr08 + View
Rhododendron simsii Rhsim12G0148800 chr12 + View
Striga asiatica SGA_v2.0_scaffold4G02378 scaffold4 - View
Salvia bowleyana SalBow5G3285 GWHASIU00000003 - View
Salix brachista Sabra12G0042900 GWHAAZH00000012 - View
Salix brachista Sabra15G0084300 GWHAAZH00000015 + View
Salix brachista Sabra17G0084000 GWHAAZH00000017 + View
Simmondsia chinensis Sc04g0004400 GWHAASQ00000004 - View
Sechium edule Sed0002240 LG12 + View
Sechium edule Sed0006488 LG08 + View
Sechium edule Sed0010316 LG06 - View
Solanum lycopersicum Solyc02g065800.3 TCP transcription factor 28 SL4.0ch02 - View
Solanum lycopersicum Solyc03g115010.3 TCP transcription factor 4 SL4.0ch03 - View
Solanum lycopersicum Solyc02g089020.2 TCP transcription factor 5 SL4.0ch02 + View
Schrenkiella parvula Sp2g24280 PTHR31072:SF24 - TRANSCRIPTION FACTOR TCP17-RELATED ch2-4 - View
Schrenkiella parvula Sp3g01220 PTHR31072//PTHR31072:SF5 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP13 ch3-1 + View
Schrenkiella parvula Sp6g34880 PTHR31072:SF24 - TRANSCRIPTION FACTOR TCP17-RELATED ch6-6 - View
Solanum pennellii Sopen02g016040 a chloroplast trans-acting factor of the psbD light-responsive promoter.TCP gene involved in heterochronic control of leaf differentiation. | plastid transcription factor 1 (PTF1) | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: cell differentiation, positive regulation of development, heterochronic, regulation of transcription, leaf morphogenesis | LOCATED IN: chloroplast | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Transcription factor, TCP , Transcription factor TCP subgroup | BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 Spenn-ch02 - View
Solanum pennellii Sopen03g034080 a chloroplast trans-acting factor of the psbD light-responsive promoter.TCP gene involved in heterochronic control of leaf differentiation. | plastid transcription factor 1 (PTF1) | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: cell differentiation, positive regulation of development, heterochronic, regulation of transcription, leaf morphogenesis | LOCATED IN: chloroplast | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Transcription factor, TCP , Transcription factor TCP subgroup | BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 Spenn-ch03 - View
Solanum tuberosum PGSC0003DMG400026568 Transcription factor ST4.03ch02 - View
Solanum tuberosum PGSC0003DMG400001362 Transcription factor ST4.03ch02 - View
Solanum tuberosum PGSC0003DMG400024632 Transcription factor ST4.03ch03 - View
Selenicereus undatus Hund09924 Scaffold_10417 + View
Trochodendron aralioides TAR371G0572 group13 + View
Trochodendron aralioides TAR629G1889 group0 - View
Theobroma cacao Thecc.04G097200 Plastid transcription factor 1 Chromosome_4 + View
Theobroma cacao Thecc.03G103800 Teosinte branched 1 Chromosome_3 + View
Tarenaya hassleriana THA.LOC104801130 transcription factor TCP5 NW_010960188.1 - View
Tarenaya hassleriana THA.LOC104818518 transcription factor TCP5-like NW_010966092.1 + View
Trifolium pratense TPR.G1986 Tp57577_TGAC_v2_LG5 - View
Trifolium pratense TPR.G4513 Tp57577_TGAC_v2_LG7 - View
Tripterygium wilfordii TWI34G1600 NC_052235.1 - View
Tripterygium wilfordii TWI81G0916 NC_052251.1 + View
Tripterygium wilfordii TWI32G0693 NC_052254.1 + View
Vaccinium macrocarpon vmacro05641 Similar to TCP13: Transcription factor TCP13 (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1383G3684 CM024070.1 - View
Vigna mungo VMungo1309G0504 CM024072.1 + View
Vigna mungo VMungo1215G1827 CM024074.1 + View
Vitis vinifera GSVIVG01008109001 chr17 - View
Vitis vinifera GSVIVG01032911001 chr14 + View