Gene: AT5G60970
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G60970
- Transcript Identifier AT5G60970.1
- Gene Type Coding gene
- Location Chr5 : 24535570-24536652 : negative
Gene Family Information
- ID HOM05D000345
- #Genes/#Species 1367/97
- Phylogenetic origin
- ID ORTHO05D000215
- #Genes/#Species 1368/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G60970.1
- symbol TCP5
- full_name TEOSINTE BRANCHED 1%2C cycloidea and PCF transcription factor 5
- uniprot Q9FME3
Descriptions
- Description TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5
- Computational description TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 (TCP5); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP domain protein 17 (TAIR:AT5G08070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009408 | IDA | Gene Ontology | response to heat | 1 |
| GO:2000024 | ISO | PLAZA Integrative Orthology | regulation of leaf development | Solyc03g115010.3 |
| GO:0010150 | IGI | Gene Ontology | leaf senescence | 2 |
| GO:0048366 | IGI | Gene Ontology | leaf development | 3 |
| GO:0045962 | IGI | Gene Ontology | positive regulation of development, heterochronic | 4 |
| GO:0030154 | IGI | Gene Ontology | cell differentiation | 4 |
| GO:0009965 | IGI | Gene Ontology | leaf morphogenesis | 4 |
| GO:0006355 | TAS | Gene Ontology | regulation of transcription, DNA-templated | 5 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003700 | ISS, IBA | Gene Ontology | DNA-binding transcription factor activity | 5 6 |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0043565 | IBA | Gene Ontology | sequence-specific DNA binding | 6 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 7 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM, IBA | Gene Ontology | nucleus | 6 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.19 | RNA biosynthesis.transcriptional regulation.transcription factor (TCP) |