Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.BG.200.p chr9 - View
Actinidia chinensis Actinidia37684 Lachesis_group13 - View
Actinidia chinensis Actinidia04949 Lachesis_group1 + View
Arabidopsis lyrata AL2G34730 scaffold_2 - View
Avicennia marina MSTRG.23079 ScioBoG_3703_HRSCAF_3719 + View
Aquilegia oxysepala Aqoxy3G03170 CHR03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.KCM1HB PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) arahy.Tifrunner.gnm1.Arahy.11 + View
Arabidopsis thaliana AT1G74850 plastid transcriptionally active 2 Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression. plastid transcriptionally active 2 (PTAC2)%3B INVOLVED IN: positive regulation of transcription%2C DNA-dependent%2C transcription from plastid promoter%3B LOCATED IN: plastid chromosome%2C chloroplast%2C nucleoid%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%2C Smr protein/MutS2 C-terminal (InterPro:IPR002625)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1)%3B Has 58866 Blast hits to 15377 proteins in 307 species: Archae - 6%3B Bacteria - 74%3B Metazoa - 884%3B Fungi - 1027%3B Plants - 54432%3B Viruses - 0%3B Other Eukaryotes - 2443 (source: NCBI BLink). Chr1 - View
Beta vulgaris EL10Ac5g10869 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr5_EL10_PGA_scaffold2 + View
Camellia sinensis var. sinensis CSS0020542 PREDICTED: pentatricopeptide repeat-containing protein At1g74850, chloroplastic [Vitis vinifera] Chr15 + View
Camellia sinensis var. sinensis CSS0050348 PREDICTED: pentatricopeptide repeat-containing protein At1g74850, chloroplastic [Vitis vinifera] Chr2 + View
Cannabis sativa CANSAT80G1888 NC_044372.1 + View
Cicer arietinum L. Ca_21873_v3 Ca_LG7_v3 - View
Corylus avellana Haze_07417 Similar to PTAC2: Pentatricopeptide repeat-containing protein At1g74850, chloroplastic (Arabidopsis thaliana OX%3D3702) 4 - View
Citrus clementina Ciclev10018817m.g scaffold_3 - View
Cardamine hirsuta CARHR068160 Pentatricopeptide repeat-containing protein, putative Chr2 - View
Carya illinoinensis CiPaw.11G034100 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr11 + View
Citrullus lanatus ClCG01G014190 Pentatricopeptide repeat-containing protein, putative CG_Chr01 + View
Cucumis melo MELO3C002229.2 Pentatricopeptide repeat-containing protein At1g74850, chloroplastic chr12 + View
Carica papaya Cpa.g.sc35.13 supercontig_35 - View
Chenopodium quinoa AUR62008306 PTAC2: Pentatricopeptide repeat-containing protein At1g74850, chloroplastic C_Quinoa_Scaffold_3422 + View
Capsella rubella Carub.0002s2163 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_2 - View
Cucumis sativus L. CsaV3_1G008120 Pentatricopeptide repeat-containing protein, chloroplastic chr1 - View
Daucus carota DCAR_016511 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv02652 GWHABJS00000019 + View
Davidia involucrata Dinv13121 GWHABJS00000006 - View
Durio zibethinus Duzib205G0682 NW_019168381.1 + View
Erigeron canadensis ECA232G0106 Conyza_canadensis_scaffold:2 - View
Eucalyptus grandis Eucgr.K02896 Chr11 + View
Erythranthe guttata Migut.I00075 scaffold_9 - View
Eutrema salsugineum Thhalv10018112m.g PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_9 + View
Fragaria x ananassa FAN13G2523 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb5-2 - View
Fragaria x ananassa FAN18G2370 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb5-1 - View
Fragaria x ananassa FAN08G1390 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb5-3 + View
Fragaria vesca FvH4_5g16180 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb5 - View
Fragaria vesca FvH4_5g08849 Fvb5 - View
Glycine max Glyma.05G032300 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm05 - View
Glycine max Glyma.17G094300 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm17 + View
Helianthus annuus HanXRQChr16g0503451 Probable plastid transcriptionally active 2 HanXRQChr16 - View
Lupinus albus Lalb_Chr12g0201281 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Lalb_Chr12 - View
Lotus japonicus Lj4g0005624 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) chr4 - View
Lonicera japonica Lj9C455T7 GWHAAZE00000009 + View
Lactuca sativa Lsat_1_v5_gn_4_74540 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Lsat_1_v8_lg_4 - View
Malus domestica MD14G1189200 plastid transcriptionally active 2 Chr14 + View
Malus domestica MD06G1183200 plastid transcriptionally active 2 Chr06 + View
Manihot esculenta Manes.06G099200 Chromosome06 - View
Nelumbo nucifera Nn4g22966 chr4 + View
Punica granatum PGR044G0185 NC_045134.1 - View
Prunus persica Prupe.5G181900 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Pp05 + View
Papaver somniferum PSO832G0921 NC_039367.1 - View
Populus trichocarpa Potri.015G069100 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Chr15 - View
Phaseolus vulgaris Phvul.003G195800 Chr03 - View
Quercus lobata QL10p013967 10 + View
Rosa chinensis RcHm_v2.0_Chr7g0179951 RcHm_v2.0_Chr7 + View
Salix brachista Sabra15G0093400 GWHAAZH00000015 - View
Simmondsia chinensis Sc12g0005700 GWHAASQ00000012 + View
Sechium edule Sed0017741 LG08 + View
Solanum lycopersicum Solyc03g113630.3 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *** A0A2G2WRC1_CAPBA) SL4.0ch03 - View
Solanum pennellii Sopen03g032670 Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression. | plastid transcriptionally active 2 (PTAC2) | INVOLVED IN: positive regulation of transcription, DNA-dependent, transcription from plastid promoter | LOCATED IN: plastid chromosome, chloroplast, nucleoid | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat , Smr protein/MutS2 C-terminal | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein Spenn-ch03 - View
Solanum tuberosum PGSC0003DMG400024573 Pentatricopeptide repeat-containing protein, chloroplastic ST4.03ch03 - View
Theobroma cacao Thecc.03G001400 Plastid transcriptionally active 2 Chromosome_3 - View
Vaccinium macrocarpon vmacro19344 Similar to PTAC2: Pentatricopeptide repeat-containing protein At1g74850, chloroplastic (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G2521 CM024074.1 + View
Vitis vinifera GSVIVG01007844001 chr17 + View