Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT5G61460 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes SMC6B (STRUCTURAL MAINTENANCE OF CHROMOSOMES 6B)%2C a component of the SMC5/6 complex. SMC5/6 complex promotes sister chromatid alignment and homologous recombination after DNA damage. hypersensitive to MMS%2C irradiation and MMC (MIM)%3B FUNCTIONS IN: ATP binding%3B INVOLVED IN: double-strand break repair%2C sister chromatid cohesion%2C chromosome segregation%2C response to X-ray%2C double-strand break repair via homologous recombination%3B LOCATED IN: chromosome%2C nucleus%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: RecF/RecN/SMC protein%2C N-terminal (InterPro:IPR003395)%3B BEST Arabidopsis thaliana protein match is: structural maintenance of chromosomes 6A (TAIR:AT5G07660.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G1940 LG-11 + View
Actinidia chinensis Actinidia24995 Lachesis_group22 - View
Arabidopsis lyrata AL8G38150 scaffold_8 - View
Arabidopsis lyrata AL6G18000 scaffold_6 + View
Brassica carinata BcaC03g13191 ChrC03 - View
Brassica carinata BcaB05g21602 ChrB05 - View
Brassica napus C07p45140 C07 - View
Brassica napus A03p47060 A03 - View
Brassica napus C02p03240 C02 + View
Brassica oleracea BolC7t45036H C7 - View
Brassica oleracea BolC2t06288H C2 + View
Brassica rapa BraA03t13829Z A03 - View
Brassica rapa BraA02t04928Z A02 + View
Cardamine hirsuta CARHR205510 structural maintenance of chromosomes 6A Chr6 - View
Cardamine hirsuta CARHR275220 Structural maintenance of chromosomes family protein Chr8 - View
Citrullus lanatus ClCG07G016820 structural maintenance of chromosomes 6A LENGTH=1058 CG_Chr07 - View
Cucumis melo MELO3C017663.2 Structural maintenance of chromosomes family protein chr07 + View
Capsella rubella Carub.0008s2215 PTHR19306//PTHR19306:SF6 - STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 // PROTEIN C23H4.6, ISOFORM A-RELATED scaffold_8 - View
Capsella rubella Carub.0006s0663 PTHR19306//PTHR19306:SF6 - STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 // PROTEIN C23H4.6, ISOFORM A-RELATED scaffold_6 + View
Cucumis sativus L. CsaV3_4G004020 Structural maintenance of chromosomes protein like chr4 - View
Durio zibethinus Duzib084G0917 NW_019167827.1 + View
Eucalyptus grandis Eucgr.A02900 Chr01 - View
Eutrema salsugineum Thhalv10012532m.g PTHR19306:SF6 - PROTEIN C23H4.6, ISOFORM A-RELATED scaffold_2 + View
Eutrema salsugineum Thhalv10003566m.g PTHR19306:SF6 - PROTEIN C23H4.6, ISOFORM A-RELATED scaffold_6 + View
Gossypium hirsutum Gohir.A12G197800 PTHR19306//PTHR19306:SF6 - STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 // PROTEIN C23H4.6, ISOFORM A-RELATED A12 + View
Gossypium hirsutum Gohir.D12G200300 PTHR19306//PTHR19306:SF6 - STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 // PROTEIN C23H4.6, ISOFORM A-RELATED D12 + View
Gossypium raimondii Gorai.008G215500 Chr08 + View
Manihot esculenta Manes.06G133600 Chromosome06 + View
Petunia axillaris Peaxi162Scf00167g00610 structural maintenance of chromosomes 6A Peaxi162Scf00167 - View
Sechium edule Sed0013674 LG13 - View
Schrenkiella parvula Sp2g24660 PTHR19306//PTHR19306:SF6 - STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 // PROTEIN C23H4.6, ISOFORM A-RELATED ch2-4 - View
Tripterygium wilfordii TWI14G1279 NC_052249.1 + View