Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT2G39480 P-glycoprotein 6 P-glycoprotein 6 (PGP6)%3B FUNCTIONS IN: ATPase activity%2C coupled to transmembrane movement of substances%3B INVOLVED IN: transport%2C transmembrane transport%3B LOCATED IN: nucleus%2C plasma membrane%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: ATPase%2C AAA+ type%2C core (InterPro:IPR003593)%2C ABC transporter-like (InterPro:IPR003439)%2C ABC transporter%2C transmembrane domain%2C type 1 (InterPro:IPR011527)%2C ABC transporter integral membrane type 1 (InterPro:IPR017940)%2C ABC transporter%2C transmembrane domain (InterPro:IPR001140)%3B BEST Arabidopsis thaliana protein match is: P-glycoprotein 20 (TAIR:AT3G55320.1)%3B Has 727628 Blast hits to 364161 proteins in 4096 species: Archae - 12661%3B Bacteria - 576901%3B Metazoa - 18207%3B Fungi - 12101%3B Plants - 9039%3B Viruses - 13%3B Other Eukaryotes - 98706 (source: NCBI BLink). Chr2 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G20120 LG-5 + View
Aethionema arabicum Aa31LG10G10310 LG-10 - View
Acer truncatum Atru.chr12.544 chr12 + View
Actinidia chinensis Actinidia02975 Lachesis_group22 - View
Arabidopsis lyrata AL4G36870 scaffold_4 - View
Arabidopsis lyrata AL5G36440 scaffold_5 - View
Avicennia marina MSTRG.8234 ScioBoG_102841_HRSCAF_103114 + View
Aquilegia oxysepala Aqoxy4G03027 CHR04 - View
Aquilegia oxysepala Aqoxy2G01999 CHR02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.EA8TAW K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) arahy.Tifrunner.gnm1.Arahy.14 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JDZ0RF PTHR24222:SF21 - ABC TRANSPORTER B FAMILY MEMBER 20-RELATED arahy.Tifrunner.gnm1.Arahy.09 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VZ1HH7 K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) arahy.Tifrunner.gnm1.Arahy.04 + View
Brassica carinata BcaC02g09744 ChrC02 - View
Brassica carinata BcaB02g08430 ChrB02 + View
Brassica carinata BcaB02g09115 ChrB02 + View
Brassica napus C04p08170 C04 + View
Brassica napus A04p04620 A04 + View
Brassica napus A03p22160 A03 - View
Brassica napus C03p26240 C03 - View
Brassica napus A05p06900 A05 + View
Brassica napus C04p37140 C04 - View
Brassica oleracea BolC3t15008H C3 - View
Brassica oleracea BolC4t25276H C4 + View
Brassica oleracea BolC4t22427H C4 + View
Brassica rapa BraA05t19655Z A05 + View
Brassica rapa BraA04t16172Z A04 + View
Brassica rapa BraA03t11447Z A03 - View
Camellia sinensis var. sinensis CSS0015971 PREDICTED: ABC transporter B family member 6-like [Solanum lycopersicum] Chr1 + View
Cicer arietinum L. Ca_11297_v3 Ca_LG4_v3 - View
Corylus avellana Haze_17013 Similar to ABCB20: ABC transporter B family member 20 (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc02_g08390 ABC transporter B family member 6 chr2 - View
Citrus clementina Ciclev10030519m.g scaffold_4 + View
Carpinus fangiana Cfa001528 Cfa01 - View
Cardamine hirsuta CARHR165300 Lipid A export ATP-binding/permease protein MsbA Chr5 - View
Cardamine hirsuta CARHR134350 Lipid A export ATP-binding/permease protein MsbA Chr4 - View
Carya illinoinensis CiPaw.02G180800 PF00005//PF00664 - ABC transporter (ABC_tran) // ABC transporter transmembrane region (ABC_membrane) Chr02 + View
Cucumis melo MELO3C025468.2 ABC transporter B family protein chr09 - View
Carica papaya Cpa.g.sc1.347 supercontig_1 + View
Chenopodium quinoa AUR62035951 ABCB6: ABC transporter B family member 6 C_Quinoa_Scaffold_3691 + View
Capsella rubella Carub.0004s2155 K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) scaffold_4 - View
Capsella rubella Carub.0005s2196 K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) scaffold_5 - View
Daucus carota DCAR_015215 hypothetical protein DCARv2_Chr4 + View
Durio zibethinus Duzib114G0068 NW_019167926.1 - View
Erigeron canadensis ECA238G1581 Conyza_canadensis_scaffold:6 + View
Eucalyptus grandis Eucgr.G02905 Chr07 + View
Erythranthe guttata Migut.F01521 scaffold_6 - View
Eutrema salsugineum Thhalv10010064m.g K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) scaffold_16 + View
Eutrema salsugineum Thhalv10016145m.g K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) scaffold_10 - View
Fragaria x ananassa FAN10G0082 K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) Fvb7-1 + View
Fragaria x ananassa FAN06G2447 K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) Fvb7-2 - View
Fragaria x ananassa FAN01G0364 K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) Fvb7-4 - View
Fragaria x ananassa FAN06G0375 K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) Fvb7-2 + View
Fragaria vesca FvH4_7g21390 PTHR24222:SF21 - ABC TRANSPORTER B FAMILY MEMBER 20-RELATED Fvb7 + View
Gossypium hirsutum Gohir.D10G222500 K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) D10 + View
Gossypium hirsutum Gohir.A05G350900 K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) A05 - View
Gossypium hirsutum Gohir.D04G061700 K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) D04 + View
Gossypium hirsutum Gohir.A10G213400 KOG0058 - Peptide exporter, ABC superfamily A10 + View
Glycine max Glyma.02G094800 K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) Gm02 - View
Glycine max Glyma.10G290800 K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) Gm10 - View
Gossypium raimondii Gorai.012G069000 Chr12 + View
Gossypium raimondii Gorai.011G252900 Chr11 + View
Helianthus annuus HanXRQChr14g0457711 Probable P-glycoprotein 6 HanXRQChr14 + View
Helianthus annuus HanXRQChr07g0200971 Probable P-glycoprotein 7 HanXRQChr07 - View
Helianthus annuus HanXRQChr15g0497031 Putative sulphonylurea receptor; P-loop containing nucleoside triphosphate hydrolase HanXRQChr15 - View
Lotus japonicus Lj1g0011982 K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) chr1 - View
Lotus japonicus Lj5g0000141 K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) chr5 + View
Lonicera japonica Lj8A89T28 GWHAAZE00000008 - View
Lonicera japonica Lj2A1052G39 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_8_16161 K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) Lsat_1_v8_lg_8 - View
Lactuca sativa Lsat_1_v5_gn_2_115960 K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) Lsat_1_v8_lg_2 + View
Malus domestica MD07G1191100 P-glycoprotein 20 Chr07 + View
Malus domestica MD01G1121400 P-glycoprotein 20 Chr01 + View
Manihot esculenta Manes.10G034900 Chromosome10 + View
Manihot esculenta Manes.07G111300 Chromosome07 - View
Medicago truncatula Medtr7g023340 ABC transporter B family protein chr7 + View
Nelumbo nucifera Nn2g12881 chr2 + View
Oryza sativa ssp. japonica Os03g0280000 Similar to MDR-like ABC transporter. chr03 - View
Punica granatum PGR044G0060 NC_045134.1 + View
Punica granatum PGR142G2178 NC_045128.1 - View
Prunus persica Prupe.2G229100 K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) Pp02 + View
Pisum sativum Psat6g236760 ABC transporter transmembrane region chr6LG2 - View
Populus trichocarpa Potri.008G050400 K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) Chr08 + View
Populus trichocarpa Potri.010G210100 K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) Chr10 - View
Phaseolus vulgaris Phvul.007G010600 K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) Chr07 + View
Phaseolus vulgaris Phvul.008G015000 Chr08 - View
Quercus lobata QL08p058678 8 + View
Rosa chinensis RcHm_v2.0_Chr1g0365761 RcHm_v2.0_Chr1 + View
Rhododendron simsii Rhsim03G0127200 chr03 + View
Salix brachista Sabra16G0098700 GWHAAZH00000016 - View
Salix brachista Sabra08G0035800 GWHAAZH00000008 - View
Salix brachista Sabra10G0162400 GWHAAZH00000010 - View
Simmondsia chinensis Sc20g0002500 GWHAASQ00000020 + View
Sechium edule Sed0003459 LG01 - View
Schrenkiella parvula Sp5g07160 K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) ch5-1 + View
Schrenkiella parvula Sp4g21780 K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) ch4-6 - View
Trochodendron aralioides TAR369G0472 group18 - View
Theobroma cacao Thecc.10G052400 P-glycoprotein 20 Chromosome_10 - View
Tarenaya hassleriana THA.LOC104810015 ABC transporter B family member 20 NW_010965122.1 - View
Trifolium pratense TPR.G14001 Tp57577_TGAC_v2_LG1 + View
Trifolium pratense TPR.G15484 Tp57577_TGAC_v2_LG6 - View
Tripterygium wilfordii TWI15G0634 NC_052247.1 + View
Vaccinium macrocarpon vmacro07146 Similar to ABCB20: ABC transporter B family member 20 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G2861 CM024071.1 - View
Vitis vinifera GSVIVG01025040001 chr6 + View
Vitis vinifera GSVIVG01016617001 chr13 + View