Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT3G53710 ARF-GAP domain 6 A member of ARF GAP domain (AGD)%2C A thaliana has 15 members%2C grouped into four classes. ARF-GAP domain 6 (AGD6)%3B FUNCTIONS IN: ARF GTPase activator activity%2C DNA binding%2C zinc ion binding%3B INVOLVED IN: regulation of ARF GTPase activity%3B LOCATED IN: cytosol%2C nucleus%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164)%3B BEST Arabidopsis thaliana protein match is: ARF-GAP domain 7 (TAIR:AT2G37550.2)%3B Has 4063 Blast hits to 3866 proteins in 268 species: Archae - 0%3B Bacteria - 51%3B Metazoa - 1999%3B Fungi - 732%3B Plants - 571%3B Viruses - 0%3B Other Eukaryotes - 710 (source: NCBI BLink). Chr3 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G9330 LG-10 - View
Acer truncatum Atru.chr8.1945 chr8 - View
Actinidia chinensis Actinidia11255 Lachesis_group21 - View
Actinidia chinensis Actinidia05305 Lachesis_group20 + View
Actinidia chinensis Actinidia13136 Lachesis_group0 - View
Arabidopsis lyrata AL5G34680 scaffold_5 - View
Arabidopsis lyrata AL4G34040 scaffold_4 - View
Avicennia marina MSTRG.19098 ScioBoG_25048_HRSCAF_25167 - View
Avicennia marina MSTRG.26762 ScioBoG_52287_HRSCAF_52434 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0ZTH3B K12492 - ADP-ribosylation factor GTPase-activating protein 1 (ARFGAP1) arahy.Tifrunner.gnm1.Arahy.16 - View
Brassica carinata BcaB01g03771 ChrB01 + View
Brassica carinata BcaB02g08513 ChrB02 + View
Brassica carinata BcaC07g39727 ChrC07 - View
Brassica carinata BcaC02g09139 ChrC02 + View
Brassica carinata BcaB02g09277 ChrB02 + View
Brassica carinata BcaC01g05611 ChrC01 + View
Brassica carinata BcaB01g00251 ChrB01 + View
Brassica carinata BcaB06g29002 ChrB06 - View
Brassica carinata BcaC02g11863 ChrC02 - View
Brassica napus C04p38840 C04 + View
Brassica napus C08p28990 C08 - View
Brassica napus A04p28670 A04 - View
Brassica napus A09p46670 A09 - View
Brassica napus A03p20710 A03 - View
Brassica napus C03p24340 C03 - View
Brassica napus C04p10440 C04 + View
Brassica napus A05p08430 A05 + View
Brassica napus A04p05920 A04 + View
Brassica oleracea BolC4t25456H C4 + View
Brassica oleracea BolC8t50502H C8 - View
Brassica oleracea BolC3t14832H C3 - View
Brassica oleracea BolC4t22642H C4 + View
Brassica rapa BraA03t11312Z A03 - View
Brassica rapa BraA04t16296Z A04 + View
Brassica rapa BraA09t40130Z A09 - View
Brassica rapa BraA04t18344Z A04 - View
Brassica rapa BraA05t19808Z A05 + View
Camellia sinensis var. sinensis CSS0025427 unnamed protein product [Coffea canephora] Chr4 + View
Camellia sinensis var. sinensis CSS0003067 unnamed protein product [Coffea canephora] Chr10 - View
Cicer arietinum L. Ca_08780_v3 Ca_LG3_v3 - View
Corylus avellana Haze_20754 Similar to AGD6: Probable ADP-ribosylation factor GTPase-activating protein AGD6 (Arabidopsis thaliana OX%3D3702) 10 + View
Citrus clementina Ciclev10013094m.g scaffold_6 - View
Ceratophyllum demersum CDE07G1903 5 - View
Ceratophyllum demersum CDE04G1149 2 + View
Carpinus fangiana Cfa017417 Cfa07 - View
Cardamine hirsuta CARHR163600 ADP-ribosylation factor GTPase-activating protein Chr5 - View
Cardamine hirsuta CARHR132060 ADP-ribosylation factor GTPase-activating protein Chr4 + View
Carya illinoinensis CiPaw.09G190100 K12492 - ADP-ribosylation factor GTPase-activating protein 1 (ARFGAP1) Chr09 + View
Citrullus lanatus ClCG10G021000 ADP-ribosylation factor GTPase-activating protein CG_Chr10 + View
Cucumis melo MELO3C009269.2 ADP-ribosylation factor GTPase-activating protein AGD7 chr04 + View
Corchorus olitorius COL.COLO4_14842 Arf GTPase activating protein AWUE01015466.1 - View
Capsella rubella Carub.0004s1947 K12492 - ADP-ribosylation factor GTPase-activating protein 1 (ARFGAP1) scaffold_4 - View
Capsella rubella Carub.0005s2029 K12492 - ADP-ribosylation factor GTPase-activating protein 1 (ARFGAP1) scaffold_5 - View
Cucumis sativus L. CsaV3_3G035010 ADP-ribosylation factor GTPase-activating protein chr3 - View
Davidia involucrata Dinv37198 GWHABJS00000021 + View
Davidia involucrata Dinv35626 GWHABJS00000015 - View
Durio zibethinus Duzib093G1169 NW_019167937.1 + View
Durio zibethinus Duzib106G1368 NW_019168492.1 + View
Durio zibethinus Duzib128G1300 NW_019168481.1 + View
Erythranthe guttata Migut.L01929 scaffold_12 + View
Eutrema salsugineum Thhalv10016645m.g K12492 - ADP-ribosylation factor GTPase-activating protein 1 (ARFGAP1) scaffold_10 - View
Eutrema salsugineum Thhalv10010333m.g K12492 - ADP-ribosylation factor GTPase-activating protein 1 (ARFGAP1) scaffold_16 + View
Fragaria x ananassa FAN05G5737 K12492 - ADP-ribosylation factor GTPase-activating protein 1 (ARFGAP1) Fvb6-3 + View
Fragaria x ananassa FAN09G0953 K12492 - ADP-ribosylation factor GTPase-activating protein 1 (ARFGAP1) Fvb6-2 - View
Fragaria vesca FvH4_6g14160 K12492 - ADP-ribosylation factor GTPase-activating protein 1 (ARFGAP1) Fvb6 - View
Gossypium hirsutum Gohir.A01G220500 K12492 - ADP-ribosylation factor GTPase-activating protein 1 (ARFGAP1) A01 + View
Gossypium hirsutum Gohir.A09G157700 PTHR23180:SF293 - ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD7 A09 - View
Gossypium hirsutum Gohir.D09G153000 PTHR23180:SF293 - ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD7 D09 - View
Gossypium hirsutum Gohir.A04G081500 K12492 - ADP-ribosylation factor GTPase-activating protein 1 (ARFGAP1) A04 + View
Glycine max Glyma.10G043600 K12492 - ADP-ribosylation factor GTPase-activating protein 1 (ARFGAP1) Gm10 - View
Glycine max Glyma.19G172700 K12492 - ADP-ribosylation factor GTPase-activating protein 1 (ARFGAP1) Gm19 - View
Glycine max Glyma.13G131300 K12492 - ADP-ribosylation factor GTPase-activating protein 1 (ARFGAP1) Gm13 - View
Glycine max Glyma.03G171800 K12492 - ADP-ribosylation factor GTPase-activating protein 1 (ARFGAP1) Gm03 - View
Gossypium raimondii Gorai.006G174500 Chr06 - View
Gossypium raimondii Gorai.002G255000 Chr02 + View
Helianthus annuus HanXRQChr07g0196241 Putative arf GTPase activating protein HanXRQChr07 + View
Lupinus albus Lalb_Chr06g0171001 KOG0704 - ADP-ribosylation factor GTPase activator Lalb_Chr06 - View
Lupinus albus Lalb_Chr21g0314281 PTHR23180//PTHR23180:SF293 - CENTAURIN/ARF // ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD7 Lalb_Chr21 - View
Lupinus albus Lalb_Chr02g0153031 K12492 - ADP-ribosylation factor GTPase-activating protein 1 (ARFGAP1) Lalb_Chr02 - View
Lupinus albus Lalb_Chr20g0113281 K12492 - ADP-ribosylation factor GTPase-activating protein 1 (ARFGAP1) Lalb_Chr20 + View
Lotus japonicus Lj1g0012032 K12492 - ADP-ribosylation factor GTPase-activating protein 1 (ARFGAP1) chr1 + View
Lotus japonicus Lj5g0019116 K12492 - ADP-ribosylation factor GTPase-activating protein 1 (ARFGAP1) chr5 + View
Lonicera japonica Lj3A970T59 GWHAAZE00000003 - View
Lonicera japonica Lj2A98G41 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_2_111501 K12492 - ADP-ribosylation factor GTPase-activating protein 1 (ARFGAP1) Lsat_1_v8_lg_2 + View
Magnolia biondii MBI14_g24318_MAGBIO AED:0.00 Chr14 + View
Malus domestica MD04G1124300 ARF-GAP domain 6 Chr04 + View
Manihot esculenta Manes.09G087400 Chromosome09 + View
Medicago truncatula Medtr1g069000 ADP-ribosylation factor GTPase-activating protein AGD10 chr1 + View
Medicago truncatula Medtr7g099830 ADP-ribosylation factor GTPase-activating protein AGD10 chr7 - View
Nelumbo nucifera Nn2g10424 chr2 - View
Olea europaea Oeu024360.2 chr15 - View
Olea europaea Oeu060046.1 scaffold83 - View
Olea europaea Oeu036163.1 scaffold309 - View
Oryza sativa ssp. japonica Os03g0278400 Similar to ADP ribosylation GTPase-like protein (Fragment). chr03 - View
Petunia axillaris Peaxi162Scf00094g01917 ADP-ribosylation factor GTPase-activating protein 1 Peaxi162Scf00094 - View
Petunia axillaris Peaxi162Scf00165g01842 ADP-ribosylation factor GTPase-activating protein 1 Peaxi162Scf00165 + View
Punica granatum PGR004G0650 NC_045131.1 - View
Prunus persica Prupe.6G251500 Pp06 + View
Papaver somniferum PSO339G5409 NC_039366.1 - View
Populus trichocarpa Potri.006G084000 K12492 - ADP-ribosylation factor GTPase-activating protein 1 (ARFGAP1) Chr06 - View
Phaseolus vulgaris Phvul.001G169400 Chr01 - View
Phaseolus vulgaris Phvul.007G157400 K12492 - ADP-ribosylation factor GTPase-activating protein 1 (ARFGAP1) Chr07 - View
Quercus lobata QL07p047529 7 + View
Rosa chinensis RcHm_v2.0_Chr3g0467101 RcHm_v2.0_Chr3 - View
Rhododendron simsii Rhsim05G0188400 chr05 + View
Striga asiatica SGA_v2.0_scaffold94G28576 scaffold94 + View
Striga asiatica SGA_v2.0_scaffold35G14216 scaffold35 + View
Salix brachista Sabra06G0063700 GWHAAZH00000006 - View
Simmondsia chinensis Sc01g0004240 GWHAASQ00000001 + View
Sechium edule Sed0027255 LG02 + View
Sechium edule Sed0012263 LG04 - View
Solanum lycopersicum Solyc10g084690.2 ADP-ribosylation factor GTPase-activating protein 1 (AHRD V3.3 *** A0A1U8EA26_CAPAN) SL4.0ch10 + View
Solanum lycopersicum Solyc09g010520.3 ADP-ribosylation factor GTPase-activating protein 1 (AHRD V3.3 *** A0A1U8EA26_CAPAN) SL4.0ch09 + View
Schrenkiella parvula Sp5g08670 K12492 - ADP-ribosylation factor GTPase-activating protein 1 (ARFGAP1) ch5-1 + View
Schrenkiella parvula Sp4g19870 K12492 - ADP-ribosylation factor GTPase-activating protein 1 (ARFGAP1) ch4-6 - View
Solanum pennellii Sopen10g034130 A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. | ARF-GAP domain 6 (AGD6) | FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding | INVOLVED IN: regulation of ARF GTPase activity | LOCATED IN: cytosol, nucleus | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein | BEST Arabidopsis thaliana protein match is: ARF-GAP domain 7 Spenn-ch10 + View
Solanum pennellii Sopen09g005250 A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. | ARF-GAP domain 6 (AGD6) | FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding | INVOLVED IN: regulation of ARF GTPase activity | LOCATED IN: cytosol, nucleus | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein | BEST Arabidopsis thaliana protein match is: ARF-GAP domain 7 Spenn-ch09 + View
Solanum tuberosum PGSC0003DMG400008921 Arf gtpase-activating protein ST4.03ch09 - View
Solanum tuberosum PGSC0003DMG401011001 Arf gtpase-activating protein ST4.03ch10 - View
Trochodendron aralioides TAR623G1730 group7 + View
Trochodendron aralioides TAR633G1330 group2 - View
Trochodendron aralioides TAR369G0725 group18 - View
Theobroma cacao Thecc.05G043300 ARF-GAP domain 7 Chromosome_5 - View
Tarenaya hassleriana THA.LOC104806570 ADP-ribosylation factor GTPase-activating protein AGD7 NW_010962392.1 + View
Tripterygium wilfordii TWI53G0560 NC_052244.1 - View
Tripterygium wilfordii TWI77G0646 NC_052236.1 + View
Vaccinium macrocarpon vmacro20129 Similar to AGD6: Probable ADP-ribosylation factor GTPase-activating protein AGD6 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G0923 CM024071.1 - View
Vigna mungo VMungo1383G0260 CM024070.1 - View
Vitis vinifera GSVIVG01034212001 chr8 + View
Zea mays Zm00001eb012610 Zm00001e001244 DNA binding protein 1 - View
Zea mays Zm00001eb397550 Zm00001e038470 ADP-ribosylation factor GTPase-activating protein AGD7 9 + View