Gene: Sopen09g005250

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen09g005250
  • Transcript Identifier Sopen09g005250.1
  • Gene Type Coding gene
  • Location Spenn-ch09 : 4039748-4043141 : positive

Gene Family Information

  • ID HOM05D002805
  • #Genes/#Species 247/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen09g005250.1

Descriptions

  • Description A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. | ARF-GAP domain 6 (AGD6) | FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding | INVOLVED IN: regulation of ARF GTPase activity | LOCATED IN: cytosol, nucleus | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein | BEST Arabidopsis thaliana protein match is: ARF-GAP domain 7
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
IEA
InterProvesicle-mediated transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005096
IEA
InterProGTPase activator activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G53710

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G53710
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G53710

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037278 ARFGAP/RecO-like zinc finger
IPR038508 ArfGAP domain superfamily
IPR001164 Arf GTPase activating protein
IPR044519 ADP-ribosylation factor GTPase-activating protein AGD6/7
Mapman id Description
22.3.2.3.2 Vesicle trafficking.post-Golgi trafficking.coat protein recruiting.ARF-GTPase activation.class II ARF-GAP protein