Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G06170 basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: 6 plant structures%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G31220.1)%3B Has 1258 Blast hits to 1258 proteins in 98 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 4%3B Fungi - 0%3B Plants - 1252%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink). Chr1 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G7190 LG-1 - View
Aethionema arabicum Aa31LG5G5710 LG-5 - View
Arabidopsis lyrata AL1G16130 scaffold_1 - View
Arabidopsis lyrata AL4G26410 scaffold_4 + View
Brassica carinata BcaC05g24299 ChrC05 + View
Brassica carinata BcaB06g28515 ChrB06 + View
Brassica carinata BcaB02g06818 ChrB02 + View
Brassica carinata BcaB02g10374 ChrB02 - View
Brassica carinata BcaB06g28430 ChrB06 + View
Brassica carinata BcaC02g11210 ChrC02 - View
Brassica napus C04p19170 C04 + View
Brassica napus A04p24030 A04 + View
Brassica napus A05p14410 A05 + View
Brassica napus A10p04800 A10 - View
Brassica napus C04p60720 C04 + View
Brassica oleracea BolC5t29220H C5 - View
Brassica oleracea BolC4t27561H C4 + View
Brassica oleracea BolC4t23450H C4 + View
Brassica rapa BraA10t42748Z A10 - View
Brassica rapa BraA04t17924Z A04 + View
Brassica rapa BraA05t20369Z A05 + View
Cardamine hirsuta CARHR124810 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr4 + View
Cardamine hirsuta CARHR005700 Basic helix-loop-helix (BHLH) family transcription factor Chr1 - View
Capsella rubella Carub.0004s1249 PTHR11514:SF29 - BASIC HELIX-LOOP-HELIX (BHLH) DNA-BINDING SUPERFAMILY PROTEIN-RELATED scaffold_4 + View
Capsella rubella Carub.0001s0553 PTHR11514:SF29 - BASIC HELIX-LOOP-HELIX (BHLH) DNA-BINDING SUPERFAMILY PROTEIN-RELATED scaffold_1 - View
Eutrema salsugineum Thhalv10017830m.g PTHR11514:SF29 - BASIC HELIX-LOOP-HELIX (BHLH) DNA-BINDING SUPERFAMILY PROTEIN-RELATED scaffold_10 + View
Eutrema salsugineum Thhalv10009992m.g KOG1318 - Helix loop helix transcription factor EB scaffold_5 + View
Schrenkiella parvula Sp4g13700 PTHR11514//PTHR11514:SF29 - MYC // BASIC HELIX-LOOP-HELIX (BHLH) DNA-BINDING SUPERFAMILY PROTEIN-RELATED ch4-6 + View
Schrenkiella parvula Sp1g04980 PTHR11514//PTHR11514:SF29 - MYC // BASIC HELIX-LOOP-HELIX (BHLH) DNA-BINDING SUPERFAMILY PROTEIN-RELATED ch1-1 - View
Tarenaya hassleriana THA.LOC104800872 transcription factor bHLH10 NW_010969548.1 + View