Gene: Carub.0004s1249
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0004s1249
- Transcript Identifier Carub.0004s1249.1
- Gene Type Coding gene
- Location scaffold_4 : 8061616-8063086 : positive
Gene Family Information
- ID HOM05D002709
- #Genes/#Species 254/91
- Phylogenetic origin
- ID ORTHO05D002914
- #Genes/#Species 255/91
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0004s1249.v1.1
- pacid 39238126
- synonym Carubv10023260m.g
Descriptions
- Description PTHR11514:SF29 - BASIC HELIX-LOOP-HELIX (BHLH) DNA-BINDING SUPERFAMILY PROTEIN-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0052543 | ISO | PLAZA Integrative Orthology | callose deposition in cell wall | AT2G31210 |
| GO:0048658 | ISO | PLAZA Integrative Orthology | anther wall tapetum development | AT2G31210 |
| GO:0043068 | ISO | PLAZA Integrative Orthology | positive regulation of programmed cell death | Os04g0599300 |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT2G31210 |
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT2G31210 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046983 | IEA | InterPro | protein dimerization activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | Os04g0599300 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | Os04g0599300 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.30 | RNA biosynthesis.transcriptional regulation.transcription factor (bHLH) |