Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G13960 WRKY DNA-binding protein 4 Encodes WRKY DNA-binding protein 4 (WRKY4). WRKY DNA-binding protein 4 (WRKY4)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657)%3B BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 3 (TAIR:AT2G03340.1)%3B Has 5876 Blast hits to 3214 proteins in 234 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 44%3B Fungi - 17%3B Plants - 5749%3B Viruses - 0%3B Other Eukaryotes - 66 (source: NCBI BLink). Chr1 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G7200 LG-2 + View
Aethionema arabicum Aa31LG1G1070 LG-1 - View
Actinidia chinensis Actinidia19928 Lachesis_group10 - View
Actinidia chinensis Actinidia31957 Lachesis_group15 - View
Actinidia chinensis Actinidia12308 Lachesis_group4 + View
Arabidopsis lyrata AL5G13050 scaffold_5 - View
Arabidopsis lyrata AL1G25800 scaffold_1 + View
Avicennia marina MSTRG.13436 ScioBoG_18778_HRSCAF_18863 - View
Avicennia marina MSTRG.741 ScioBoG_102831_HRSCAF_103044 + View
Avicennia marina MSTRG.23911 ScioBoG_3895_HRSCAF_3912 + View
Amaranthus hybridus Ah.03g134610 Probable WRKY transcription factor 3 (WRKY DNA-binding protein 3) AmaHy_arrow1_Scaffold_3 + View
Aquilegia oxysepala Aqoxy3G03515 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VPMT8W PTHR31221:SF8 - WRKY TRANSCRIPTION FACTOR 57-RELATED arahy.Tifrunner.gnm1.Arahy.13 + View
Brassica carinata BcaB08g34350 ChrB08 + View
Brassica carinata BcaB03g13118 ChrB03 - View
Brassica carinata BcaC07g41612 ChrC07 - View
Brassica carinata BcaC05g25291 ChrC05 + View
Brassica carinata BcaC03g17210 ChrC03 - View
Brassica carinata BcaB07g30303 ChrB07 + View
Brassica carinata BcaC06g34004 ChrC06 + View
Brassica carinata BcaC07g38714 ChrC07 + View
Brassica carinata BcaC06g31188 ChrC06 + View
Brassica napus A06p43190 A06 + View
Brassica napus A09p62590 A09 - View
Brassica napus A02p33400 A02 - View
Brassica napus C07p33810 C07 - View
Brassica napus C05p11720 C05 + View
Brassica napus C02p51380 C02 - View
Brassica napus C08p46150 C08 - View
Brassica napus C08p16440 C08 + View
Brassica napus A06p09960 A06 + View
Brassica napus A08p32150 A08 - View
Brassica oleracea BolC2t11228H C2 - View
Brassica oleracea BolC5t29918H C5 + View
Brassica oleracea BolC8t49269H C8 + View
Brassica oleracea BolC8t52165H C8 - View
Brassica oleracea BolC7t43895H C7 - View
Brassica rapa BraA06t24182Z A06 + View
Brassica rapa BraA02t08363Z A02 - View
Brassica rapa BraA08t35138Z A08 - View
Brassica rapa BraA06t27207Z A06 + View
Brassica rapa BraA09t41622Z A09 - View
Beta vulgaris EL10Ac6g13276 PTHR31221:SF22 - WRKY TRANSCRIPTION FACTOR 3-RELATED Chr6_EL10_PGA_scaffold0 - View
Camellia sinensis var. sinensis CSS0032925 WRKY transcription factor [Camellia sinensis] Chr1 + View
Camellia sinensis var. sinensis CSS0050267 WRKY transcription factor [Camellia sinensis] Chr2 - View
Capsicum annuum CAN.G206.183 PGAv.1.6.scaffold206 - View
Corylus avellana Haze_11948 Similar to WRKY3: Probable WRKY transcription factor 3 (Arabidopsis thaliana OX%3D3702) 9 + View
Citrus clementina Ciclev10031225m.g scaffold_4 - View
Cardamine hirsuta CARHR014330 WRKY DNA-binding protein 4 Chr1 + View
Cardamine hirsuta CARHR145680 WRKY DNA-binding protein 3 Chr5 - View
Carya illinoinensis CiPaw.06G089200 PTHR31221:SF22 - WRKY TRANSCRIPTION FACTOR 3-RELATED Chr06 - View
Carya illinoinensis CiPaw.04G014200 PF03106 - WRKY DNA -binding domain (WRKY) Chr04 + View
Citrullus lanatus ClCG05G023960 WRKY DNA-binding protein 3 LENGTH=513 CG_Chr05 + View
Cucumis melo MELO3C012130.2 WRKY transcription factor, putative chr10 + View
Cucumis melo MELO3C022014.2 WRKY transcription factor, putative chr09 + View
Cucumis melo MELO3C011432.2 WRKY family transcription factor chr03 - View
Carica papaya Cpa.g.sc1.76 supercontig_1 - View
Chenopodium quinoa AUR62032850 WRKY3: Probable WRKY transcription factor 3 C_Quinoa_Scaffold_3751 - View
Chenopodium quinoa AUR62006298 WRKY33: Probable WRKY transcription factor 33 C_Quinoa_Scaffold_1001 - View
Chenopodium quinoa AUR62005858 WRKY3: Probable WRKY transcription factor 3 C_Quinoa_Scaffold_1214 - View
Capsella rubella Carub.0005s0232 PTHR31221//PTHR31221:SF22 - FAMILY NOT NAMED // WRKY TRANSCRIPTION FACTOR 3-RELATED scaffold_5 - View
Capsella rubella Carub.0001s1365 PTHR31221//PTHR31221:SF22 - FAMILY NOT NAMED // WRKY TRANSCRIPTION FACTOR 3-RELATED scaffold_1 + View
Cucumis sativus L. CsaV3_5G038330 WRKY transcription factor, putative chr5 - View
Cucumis sativus L. CsaV3_5G033090 WRKY transcription factor chr5 - View
Daucus carota DCAR_007177 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv16694 GWHABJS00000018 - View
Davidia involucrata Dinv11498 GWHABJS00000012 + View
Davidia involucrata Dinv33794 GWHABJS00000014 - View
Durio zibethinus Duzib248G0226 NW_019168048.1 - View
Erythranthe guttata Migut.E00056 scaffold_5 - View
Erythranthe guttata Migut.L01206 scaffold_12 - View
Erythranthe guttata Migut.K01298 scaffold_11 + View
Eutrema salsugineum Thhalv10004015m.g PTHR31221:SF22 - WRKY TRANSCRIPTION FACTOR 3-RELATED scaffold_6 + View
Eutrema salsugineum Thhalv10007428m.g PTHR31221:SF22 - WRKY TRANSCRIPTION FACTOR 3-RELATED scaffold_5 - View
Fragaria x ananassa FAN12G3059 PTHR31221:SF22 - WRKY TRANSCRIPTION FACTOR 3-RELATED Fvb4-3 - View
Fragaria x ananassa FAN07G0865 PTHR31221//PTHR31221:SF22 - FAMILY NOT NAMED // WRKY TRANSCRIPTION FACTOR 3-RELATED Fvb4-4 - View
Gossypium hirsutum Gohir.D02G128800 PTHR31221:SF8 - WRKY TRANSCRIPTION FACTOR 57-RELATED D02 + View
Gossypium hirsutum Gohir.A03G103600 PTHR31221:SF8 - WRKY TRANSCRIPTION FACTOR 57-RELATED A03 + View
Gossypium hirsutum Gohir.D13G079000 PTHR31221//PTHR31221:SF22 - FAMILY NOT NAMED // WRKY TRANSCRIPTION FACTOR 3-RELATED D13 - View
Gossypium hirsutum Gohir.A12G162100 PTHR31221:SF8 - WRKY TRANSCRIPTION FACTOR 57-RELATED A12 - View
Gossypium hirsutum Gohir.D04G046300 PTHR31221//PTHR31221:SF22 - FAMILY NOT NAMED // WRKY TRANSCRIPTION FACTOR 3-RELATED D04 - View
Gossypium hirsutum Gohir.D12G165400 PTHR31221:SF8 - WRKY TRANSCRIPTION FACTOR 57-RELATED D12 - View
Gossypium hirsutum Gohir.D09G011500 PF03106 - WRKY DNA -binding domain (WRKY) D09 - View
Glycine max Glyma.20G028000 PTHR31221//PTHR31221:SF22 - FAMILY NOT NAMED // WRKY TRANSCRIPTION FACTOR 3-RELATED Gm20 + View
Glycine max Glyma.07G227200 PTHR31221//PTHR31221:SF22 - FAMILY NOT NAMED // WRKY TRANSCRIPTION FACTOR 3-RELATED Gm07 + View
Glycine max Glyma.01G053800 PTHR31221//PTHR31221:SF22 - FAMILY NOT NAMED // WRKY TRANSCRIPTION FACTOR 3-RELATED Gm01 - View
Glycine max Glyma.02G112100 PTHR31221//PTHR31221:SF22 - FAMILY NOT NAMED // WRKY TRANSCRIPTION FACTOR 3-RELATED Gm02 - View
Gossypium raimondii Gorai.012G051500 Chr12 - View
Gossypium raimondii Gorai.006G013300 Chr06 - View
Gossypium raimondii Gorai.013G090200 Chr13 - View
Gossypium raimondii Gorai.005G144500 Chr05 + View
Hydrangea macrophylla Hma1.2p1_0354F.1_g133750 Hma1.2p1_0354F.1 + View
Lupinus albus Lalb_Chr10g0098671 PTHR31221:SF8 - WRKY TRANSCRIPTION FACTOR 57-RELATED Lalb_Chr10 + View
Lupinus albus Lalb_Chr05g0220151 PTHR31221//PTHR31221:SF22 - FAMILY NOT NAMED // WRKY TRANSCRIPTION FACTOR 3-RELATED Lalb_Chr05 + View
Lotus japonicus Lj1g0023943 PF03106 - WRKY DNA -binding domain (WRKY) chr1 + View
Lotus japonicus Lj2g0016696 PTHR31221:SF22 - WRKY TRANSCRIPTION FACTOR 3-RELATED chr2 - View
Lonicera japonica Lj6C781T6 GWHAAZE00000006 - View
Lonicera japonica Lju41A8G103 GWHAAZE00000094 + View
Lonicera japonica Lj3P1031T26 GWHAAZE00000003 - View
Lactuca sativa Lsat_1_v5_gn_8_48640 PTHR31221:SF22 - WRKY TRANSCRIPTION FACTOR 3-RELATED Lsat_1_v8_lg_8 + View
Lactuca sativa Lsat_1_v5_gn_4_10320 PTHR31221:SF35 - WRKY TRANSCRIPTION FACTOR 10-RELATED Lsat_1_v8_lg_4 - View
Malus domestica MD09G1056600 WRKY DNA-binding protein 3 Chr09 - View
Malus domestica MD13G1064700 WRKY DNA-binding protein 57 Chr13 - View
Manihot esculenta Manes.05G106900 Chromosome05 - View
Manihot esculenta Manes.01G100400 Chromosome01 + View
Manihot esculenta Manes.01G029300 Chromosome01 - View
Medicago truncatula Medtr4g082580 WRKY transcription factor 3 chr4 - View
Olea europaea Oeu062137.1 chr10 - View
Olea europaea Oeu004566.1 scaffold1167 + View
Petunia axillaris Peaxi162Scf00222g00117 WRKY DNA-binding protein 4 Peaxi162Scf00222 + View
Punica granatum PGR119G0435 NC_045132.1 + View
Papaver somniferum PSO017G4476 NC_039362.1 - View
Populus trichocarpa Potri.008G091900 PTHR31221//PTHR31221:SF22 - FAMILY NOT NAMED // WRKY TRANSCRIPTION FACTOR 3-RELATED Chr08 - View
Phaseolus vulgaris Phvul.002G103400 Chr02 + View
Quercus lobata QL03p069961 3 - View
Rosa chinensis RcHm_v2.0_Chr4g0439041 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim08G0072700 chr08 - View
Rhododendron simsii Rhsim12G0077700 chr12 + View
Striga asiatica SGA_v2.0_scaffold16G07741 scaffold16 - View
Striga asiatica SGA_v2.0_scaffold413G51169 scaffold413 + View
Salix brachista Sabra08G0068800 GWHAAZH00000008 - View
Simmondsia chinensis Sc11g0002210 GWHAASQ00000011 - View
Sechium edule Sed0010750 LG11 - View
Sechium edule Sed0015144 LG03 - View
Sechium edule Sed0018215 LG06 + View
Sechium edule Sed0000607 LG07 - View
Solanum lycopersicum Solyc02g088340.4 WRKY transcription factor 3 SL4.0ch02 - View
Schrenkiella parvula Sp1g12320 PTHR31221//PTHR31221:SF22 - FAMILY NOT NAMED // WRKY TRANSCRIPTION FACTOR 3-RELATED ch1-1 + View
Schrenkiella parvula Sp2g14270 PTHR31221:SF22 - WRKY TRANSCRIPTION FACTOR 3-RELATED ch2-4 - View
Solanum pennellii Sopen02g033030 Encodes WRKY DNA-binding protein 3 (WRKY3). | WRKY DNA-binding protein 3 (WRKY3) | CONTAINS InterPro DOMAIN/s: DNA-binding WRKY | BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 4 Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400028335 Transcription factor WRKY2 ST4.03ch05 - View
Theobroma cacao Thecc.04G088400 WRKY DNA-binding protein 3 Chromosome_4 + View
Theobroma cacao Thecc.02G338600 WRKY DNA-binding protein 4 Chromosome_2 + View
Tarenaya hassleriana THA.LOC104824070 probable WRKY transcription factor 4 NW_010966881.1 + View
Tarenaya hassleriana THA.LOC104805180 probable WRKY transcription factor 4 NW_010961290.1 - View
Tarenaya hassleriana THA.LOC104822023 probable WRKY transcription factor 57 NW_010966617.1 - View
Tarenaya hassleriana THA.LOC104801812 probable WRKY transcription factor 4 NW_010970030.1 - View
Trifolium pratense TPR.G34027 Tp57577_TGAC_v2_LG2 + View
Trifolium pratense TPR.G24472 Tp57577_TGAC_v2_LG2 - View
Tripterygium wilfordii TWI60G0306 NC_052246.1 - View
Vaccinium macrocarpon vmacro01340 Similar to WRKY4: Probable WRKY transcription factor 4 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro18165 Similar to WRKY4: Probable WRKY transcription factor 4 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G1107 CM024074.1 - View