Gene: Solyc02g088340.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc02g088340.4
- Transcript Identifier Solyc02g088340.4.1
- Gene Type Coding gene
- Location SL4.0ch02 : 48499996-48502397 : negative
Gene Family Information
- ID HOM05D000081
- #Genes/#Species 3710/99
- Phylogenetic origin
- ID ORTHO05D000036
- #Genes/#Species 3245/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc02g088340.4.1
- uniprot A0A3Q7F961
- gene_id Solyc02g088340
Descriptions
- Description WRKY transcription factor 3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0032968 | IBA | GOA Database | positive regulation of transcription elongation from RNA polymerase II promoter | |
| GO:0006468 | IBA IEA | GOA Database | protein phosphorylation | |
| GO:0070816 | IBA | GOA Database | phosphorylation of RNA polymerase II C-terminal domain | |
| GO:0009414 | IDA, IEP | Gene Ontology | response to water deprivation | 1 |
| GO:0016310 | IEA | GOA Database | phosphorylation | |
| GO:0051726 | IEA | GOA Database | regulation of cell cycle | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016301 | IEA | GOA Database | kinase activity | |
| GO:0008353 | IBA | GOA Database | RNA polymerase II CTD heptapeptide repeat kinase activity | |
| GO:0004693 | IBA | GOA Database | cyclin-dependent protein serine/threonine kinase activity | |
| GO:0004672 | IEA | GOA Database | protein kinase activity | |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0043565 | IEA | InterPro | sequence-specific DNA binding | |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IBA | GOA Database | nucleus | |
| GO:0000307 | IBA | GOA Database | cyclin-dependent protein kinase holoenzyme complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.22.1 | RNA biosynthesis.transcriptional regulation.WRKY transcription factor activity.transcription factor (WRKY) |