Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL4G43630 scaffold_4 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G14330 LG-10 - View
Acer truncatum Atru.chr5.36 chr5 - View
Actinidia chinensis Actinidia05793 Lachesis_group20 + View
Actinidia chinensis Actinidia30958 Lachesis_group0 + View
Avicennia marina MSTRG.28129 ScioBoG_94932_HRSCAF_95134 - View
Avicennia marina MSTRG.20660 ScioBoG_26180_HRSCAF_26306 - View
Avicennia marina MSTRG.4965 ScioBoG_102838_HRSCAF_103081 + View
Amaranthus hybridus Ah.05g177610 Dynamin-related protein 1E (Dynamin-like protein 4) (Dynamin-like protein DLP2) (Dynamin-like protein E) AmaHy_arrow1_Scaffold_5 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.EUV7FN PTHR11566//PTHR11566:SF77 - DYNAMIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.06 + View
Arabidopsis thaliana AT2G44590 DYNAMIN-like 1D DYNAMIN-like 1D (DL1D)%3B FUNCTIONS IN: GTP binding%2C GTPase activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: sperm cell%2C male gametophyte%2C flower%3B EXPRESSED DURING: M germinated pollen stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130)%2C Dynamin%2C GTPase domain (InterPro:IPR001401)%2C Dynamin%2C GTPase region%2C conserved site (InterPro:IPR019762)%2C GTPase effector domain%2C GED (InterPro:IPR020850)%2C Dynamin central region (InterPro:IPR000375)%3B BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1E (TAIR:AT3G60190.1)%3B Has 2767 Blast hits to 2641 proteins in 298 species: Archae - 0%3B Bacteria - 8%3B Metazoa - 1053%3B Fungi - 825%3B Plants - 570%3B Viruses - 0%3B Other Eukaryotes - 311 (source: NCBI BLink). DYNAMIN-like 1D (DL1D)%3B FUNCTIONS IN: GTP binding%2C GTPase activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: sperm cell%2C male gametophyte%2C flower%3B EXPRESSED DURING: M germinated pollen stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130)%2C Dynamin%2C GTPase region%2C conserved site (InterPro:IPR019762)%2C Dynamin%2C GTPase domain (InterPro:IPR001401)%2C GTPase effector domain%2C GED (InterPro:IPR020850)%2C Dynamin central region (InterPro:IPR000375)%3B BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1E (TAIR:AT3G60190.1)%3B Has 2860 Blast hits to 2735 proteins in 316 species: Archae - 2%3B Bacteria - 41%3B Metazoa - 1056%3B Fungi - 842%3B Plants - 574%3B Viruses - 0%3B Other Eukaryotes - 345 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT3G60190 DYNAMIN-like 1E At3g60190 encodes Arabidopsis dynamin-related protein 1E%2C DRP1E%2C also known as EDR3%2C ADL4 and ADL1E%2C which is 624 amino acid residues long%2C has a predicted mass of 69.8 kDa and a pI of 7.5. Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1)%2C consisting of five members in Arabidopsis (A%2C B%2C C%2C D%2C E). This class is characterized by having an N-terminal GTPase domain%2C a central %E2%80%98dynamin 2%E2%80%98 domain and a C-terminal GTPase effector domain (GED)%2C a typical structure for plant dynamin-related proteins. However%2C this class lacks a PH domain and a proline-rich domain%2C which are found in classical animal dynamin-like proteins. Based on work on animal dynamins%2C the plant DRP1 proteins should be able to form polymeric structures that wrap around membranes to facilitate membrane tubulation and pinching off of vesicles%2C processes that are essential to vesicle trafficking and membrane compartmentalization. The edr3 mutation causes a P77L substitution in the G2 motif of the GTPase domain of DRP1E. edr3 mutant Arabidopsis plants display enhanced cell death in response to powdery mildew infection. DYNAMIN-like 1E (DL1E)%3B FUNCTIONS IN: GTP binding%2C GTPase activity%3B INVOLVED IN: response to cadmium ion%2C vesicle-mediated transport%2C defense response to fungus%3B LOCATED IN: mitochondrion%2C plasma membrane%2C vacuole%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130)%2C Dynamin%2C GTPase domain (InterPro:IPR001401)%2C Dynamin%2C GTPase region%2C conserved site (InterPro:IPR019762)%2C GTPase effector domain%2C GED (InterPro:IPR020850)%2C Dynamin central region (InterPro:IPR000375)%3B BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1D (TAIR:AT2G44590.3)%3B Has 2915 Blast hits to 2753 proteins in 324 species: Archae - 2%3B Bacteria - 53%3B Metazoa - 1058%3B Fungi - 869%3B Plants - 577%3B Viruses - 0%3B Other Eukaryotes - 356 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaC02g10118 ChrC02 - View
Brassica carinata BcaB06g29387 ChrB06 - View
Brassica carinata BcaB02g08187 ChrB02 + View
Brassica carinata BcaC07g40518 ChrC07 + View
Brassica carinata BcaB02g07443 ChrB02 - View
Brassica carinata BcaC02g07101 ChrC02 - View
Brassica carinata BcaC07g40413 ChrC07 - View
Brassica napus A09p52470 A09 - View
Brassica napus C04p71100 C04 - View
Brassica napus C04p32510 C04 + View
Brassica napus A04p33390 A04 - View
Brassica napus A04p01790 A04 + View
Brassica napus C08p35210 C08 - View
Brassica oleracea BolC4t24816H C4 + View
Brassica oleracea BolC4t28613H C4 - View
Brassica oleracea BolC8t51116H C8 - View
Brassica rapa BraA04t18800Z A04 - View
Brassica rapa BraA09t40677Z A09 - View
Brassica rapa BraA04t15903Z A04 + View
Capsicum annuum CAN.G756.10 PGAv.1.6.scaffold756 - View
Citrus clementina Ciclev10019323m.g scaffold_3 + View
Ceratophyllum demersum CDE02G0402 1 + View
Cardamine hirsuta CARHR170510 DYNAMIN-like 1E Chr5 - View
Cardamine hirsuta CARHR139810 DYNAMIN-like 1D Chr4 - View
Citrullus lanatus ClCG05G002830 Dynamin, putative CG_Chr05 - View
Cucumis melo MELO3C006260.2 Dynamin, putative chr06 - View
Chenopodium quinoa AUR62023360 DRP1E: Dynamin-related protein 1E C_Quinoa_Scaffold_1352 + View
Capsella rubella Carub.0005s2692 PTHR11566//PTHR11566:SF80 - DYNAMIN // DYNAMIN-RELATED PROTEIN 1C scaffold_5 - View
Capsella rubella Carub.0004s2714 PTHR11566//PTHR11566:SF80 - DYNAMIN // DYNAMIN-RELATED PROTEIN 1C scaffold_4 - View
Cucumis sativus L. CsaV3_3G010360 Dynamin, putative chr3 - View
Daucus carota DCAR_015775 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv44012 GWHABJS00000020 - View
Davidia involucrata Dinv43583 GWHABJS00000016 - View
Erigeron canadensis ECA236G1449 Conyza_canadensis_scaffold:3 + View
Erigeron canadensis ECA248G2374 Conyza_canadensis_scaffold:9 - View
Erythranthe guttata Migut.B01478 scaffold_2 - View
Erythranthe guttata Migut.N01710 scaffold_14 - View
Eutrema salsugineum Thhalv10001749m.g PTHR11566:SF80 - DYNAMIN-RELATED PROTEIN 1C scaffold_22 - View
Eutrema salsugineum Thhalv10005838m.g PTHR11566:SF80 - DYNAMIN-RELATED PROTEIN 1C scaffold_19 + View
Fragaria x ananassa FAN10G3282 PTHR11566//PTHR11566:SF80 - DYNAMIN // DYNAMIN-RELATED PROTEIN 1C Fvb7-1 - View
Fragaria x ananassa FAN06G2893 PTHR11566:SF80 - DYNAMIN-RELATED PROTEIN 1C Fvb7-2 + View
Fragaria x ananassa FAN13G2119 PTHR11566//PTHR11566:SF77 - DYNAMIN // SUBFAMILY NOT NAMED Fvb5-2 - View
Fragaria x ananassa FAN03G2146 PTHR11566//PTHR11566:SF80 - DYNAMIN // DYNAMIN-RELATED PROTEIN 1C Fvb7-3 - View
Gossypium hirsutum Gohir.A12G211300 PTHR11566//PTHR11566:SF77 - DYNAMIN // SUBFAMILY NOT NAMED A12 - View
Glycine max Glyma.07G120900 PTHR11566//PTHR11566:SF80 - DYNAMIN // DYNAMIN-RELATED PROTEIN 1C Gm07 + View
Glycine max Glyma.03G102800 PTHR11566//PTHR11566:SF80 - DYNAMIN // DYNAMIN-RELATED PROTEIN 1C Gm03 - View
Gossypium raimondii Gorai.008G229500 Chr08 - View
Lotus japonicus Lj3g0025908 PTHR11566:SF80 - DYNAMIN-RELATED PROTEIN 1C chr3 + View
Lonicera japonica Lj9C549T4 GWHAAZE00000009 - View
Malus domestica MD07G1087500 DYNAMIN-like 1E Chr07 + View
Manihot esculenta Manes.05G059400 Chromosome05 + View
Manihot esculenta Manes.01G275100 Chromosome01 - View
Medicago truncatula Medtr8g009510 dynamin 1E-like protein chr8 + View
Punica granatum PGR142G1868 NC_045128.1 + View
Punica granatum PGR042G1185 NC_045130.1 + View
Prunus persica Prupe.2G114300 PTHR11566//PTHR11566:SF77 - DYNAMIN // SUBFAMILY NOT NAMED Pp02 + View
Populus trichocarpa Potri.007G118300 K17065 - dynamin 1-like protein (DNM1L) Chr07 - View
Populus trichocarpa Potri.002G135100 PTHR11566//PTHR11566:SF77 - DYNAMIN // SUBFAMILY NOT NAMED Chr02 - View
Phaseolus vulgaris Phvul.010G040900 PTHR11566:SF80 - DYNAMIN-RELATED PROTEIN 1C Chr10 - View
Quercus lobata QL04p025889 4 - View
Rhododendron simsii Rhsim07G0039700 chr07 + View
Salvia bowleyana SalBow5G5211 GWHASIU00000003 - View
Salix brachista Sabra02G0104900 GWHAAZH00000002 - View
Simmondsia chinensis Sc02g0003300 GWHAASQ00000002 - View
Sechium edule Sed0027891 LG12 - View
Solanum lycopersicum Solyc08g077360.3 Dynamin (AHRD V3.3 *** E5GB64_CUCME) SL4.0ch08 - View
Solanum lycopersicum Solyc01g088520.3 Dynamin-related protein 1E (AHRD V3.3 *-* A0A1U8EK16_CAPAN) SL4.0ch01 - View
Schrenkiella parvula Sp5g03020 PTHR11566//PTHR11566:SF80 - DYNAMIN // DYNAMIN-RELATED PROTEIN 1C ch5-1 + View
Schrenkiella parvula Sp4g26680 PTHR11566:SF80 - DYNAMIN-RELATED PROTEIN 1C ch4-6 - View
Solanum pennellii Sopen05g029040 Encodes a dynamin-like protein related to phragmoplastin. Mutations in this gene, in combination with mutation in ADL1E, result in defects in embryogenesis, cell plate formation and trichome branching. Also controls vascular patterning in combination with VAN3 and GNOM. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis. | dynamin-like protein (DL1) | CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector , Dynamin, GTPase region, conserved site , GTPase effector domain, GED , Dynamin, GTPase domain , Dynamin central region | BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1B ., Dynamin central domain Spenn-ch05 + View
Solanum pennellii Sopen01g035380 At3g60190 encodes Arabidopsis dynamin-related protein 1E, DRP1E, also known as EDR3, ADL4 and ADL1E, which is 624 amino acid residues long, has a predicted mass of 69.8 kDa and a pI of 7.5. Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1), consisting of five members in Arabidopsis (A, B, C, D, E). This class is characterized by having an N-terminal GTPase domain, a central ëdynamin 2ë domain and a C-terminal GTPase effector domain (GED), a typical structure for plant dynamin-related proteins. However, this class lacks a PH domain and a proline-rich domain, which are found in classical animal dynamin-like proteins. Based on work on animal dynamins, the plant DRP1 proteins should be able to form polymeric structures that wrap around membranes to facilitate membrane tubulation and pinching off of vesicles, processes that are essential to vesicle trafficking and membrane compartmentalization. The edr3 mutation causes a P77L substitution in the G2 motif of the GTPase domain of DRP1E. edr3 mutant Arabidopsis plants display enhanced cell death in response to powdery mildew infection. | DYNAMIN-like 1E (DL1E) | FUNCTIONS IN: GTP binding, GTPase activity | INVOLVED IN: response to cadmium ion, vesicle-mediated transport, defense response to fungus | LOCATED IN: mitochondrion, plasma membrane, vacuole | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector , Dynamin, GTPase domain , Dynamin, GTPase region, conserved site , GTPase effector domain, GED , Dynamin central region | BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1D Spenn-ch01 - View
Solanum pennellii Sopen08g025940 At3g60190 encodes Arabidopsis dynamin-related protein 1E, DRP1E, also known as EDR3, ADL4 and ADL1E, which is 624 amino acid residues long, has a predicted mass of 69.8 kDa and a pI of 7.5. Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1), consisting of five members in Arabidopsis (A, B, C, D, E). This class is characterized by having an N-terminal GTPase domain, a central ëdynamin 2ë domain and a C-terminal GTPase effector domain (GED), a typical structure for plant dynamin-related proteins. However, this class lacks a PH domain and a proline-rich domain, which are found in classical animal dynamin-like proteins. Based on work on animal dynamins, the plant DRP1 proteins should be able to form polymeric structures that wrap around membranes to facilitate membrane tubulation and pinching off of vesicles, processes that are essential to vesicle trafficking and membrane compartmentalization. The edr3 mutation causes a P77L substitution in the G2 motif of the GTPase domain of DRP1E. edr3 mutant Arabidopsis plants display enhanced cell death in response to powdery mildew infection. | DYNAMIN-like 1E (DL1E) | FUNCTIONS IN: GTP binding, GTPase activity | INVOLVED IN: response to cadmium ion, vesicle-mediated transport, defense response to fungus | LOCATED IN: mitochondrion, plasma membrane, vacuole | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector , Dynamin, GTPase domain , Dynamin, GTPase region, conserved site , GTPase effector domain, GED , Dynamin central region | BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1D Spenn-ch08 - View
Solanum tuberosum PGSC0003DMG400007013 Phragmoplastin ST4.03ch05 - View
Solanum tuberosum PGSC0003DMG400001847 Dynamin ST4.03ch08 - View
Selenicereus undatus Hund27421 Scaffold_2055 - View
Trochodendron aralioides TAR374G0628 group12 - View
Tarenaya hassleriana THA.LOC104802509 dynamin-related protein 1E NW_010970490.1 + View
Tarenaya hassleriana THA.LOC104827582 dynamin-related protein 1E-like NW_010967884.1 - View
Tripterygium wilfordii TWI14G0171 NC_052249.1 + View
Tripterygium wilfordii TWI23G1300 NC_052239.1 - View
Vaccinium macrocarpon vmacro13535 Similar to DRP1E: Dynamin-related protein 1E (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro21090 Similar to DRP1E: Dynamin-related protein 1E (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0331G1587 CM024078.1 - View