Gene: Sopen08g025940
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen08g025940
- Transcript Identifier Sopen08g025940.1
- Gene Type Coding gene
- Location Spenn-ch08 : 65680413-65684921 : negative
Gene Family Information
- ID HOM05D000331
- #Genes/#Species 1415/100
- Phylogenetic origin
- ID ORTHO05D000732
- #Genes/#Species 646/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen08g025940.1
Descriptions
- Description At3g60190 encodes Arabidopsis dynamin-related protein 1E, DRP1E, also known as EDR3, ADL4 and ADL1E, which is 624 amino acid residues long, has a predicted mass of 69.8 kDa and a pI of 7.5. Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1), consisting of five members in Arabidopsis (A, B, C, D, E). This class is characterized by having an N-terminal GTPase domain, a central ëdynamin 2ë domain and a C-terminal GTPase effector domain (GED), a typical structure for plant dynamin-related proteins. However, this class lacks a PH domain and a proline-rich domain, which are found in classical animal dynamin-like proteins. Based on work on animal dynamins, the plant DRP1 proteins should be able to form polymeric structures that wrap around membranes to facilitate membrane tubulation and pinching off of vesicles, processes that are essential to vesicle trafficking and membrane compartmentalization. The edr3 mutation causes a P77L substitution in the G2 motif of the GTPase domain of DRP1E. edr3 mutant Arabidopsis plants display enhanced cell death in response to powdery mildew infection. | DYNAMIN-like 1E (DL1E) | FUNCTIONS IN: GTP binding, GTPase activity | INVOLVED IN: response to cadmium ion, vesicle-mediated transport, defense response to fungus | LOCATED IN: mitochondrion, plasma membrane, vacuole | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector , Dynamin, GTPase domain , Dynamin, GTPase region, conserved site , GTPase effector domain, GED , Dynamin central region | BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1D
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003924 | IEA | InterPro | GTPase activity | |
| GO:0005525 | IEA | InterPro | GTP binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 13.4.2.6 | Cell cycle organisation.cytokinesis.cell-plate formation.phragmoplastin (DRP1) |