Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL8G32290 scaffold_8 + View
AL1G63410 scaffold_1 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G710 LG-8 + View
Aethionema arabicum Aa31LG3G12410 LG-3 + View
Aethionema arabicum Aa31LG10G1160 LG-10 - View
Actinidia chinensis Actinidia00901 Lachesis_group13 + View
Actinidia chinensis Actinidia16243 Lachesis_group24 + View
Avicennia marina MSTRG.18025 ScioBoG_19834_HRSCAF_19925 - View
Aquilegia oxysepala Aqoxy1G00477 CHR01 - View
Arabidopsis thaliana AT1G55360 tRNA-splicing ligase (DUF239) Protein of Unknown Function (DUF239)%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239%2C plant (InterPro:IPR004314)%3B BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT3G13510.1)%3B Has 753 Blast hits to 700 proteins in 28 species: Archae - 0%3B Bacteria - 15%3B Metazoa - 0%3B Fungi - 10%3B Plants - 728%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT5G56530 tRNA-splicing ligase (DUF239) Protein of Unknown Function (DUF239)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239%2C plant (InterPro:IPR004314)%3B BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G55360.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Protein of Unknown Function (DUF239)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239%2C plant (InterPro:IPR004314)%3B BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G55360.1). Chr5 + View
Arabidopsis thaliana AT3G13510 carboxyl-terminal peptidase, putative (DUF239) Protein of Unknown Function (DUF239)%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239%2C plant (InterPro:IPR004314)%3B BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G55360.1)%3B Has 759 Blast hits to 705 proteins in 28 species: Archae - 0%3B Bacteria - 15%3B Metazoa - 0%3B Fungi - 10%3B Plants - 734%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaC01g01517 ChrC01 - View
Brassica carinata BcaC04g20077 ChrC04 - View
Brassica carinata BcaB04g16960 ChrB04 + View
Brassica napus A08p00690 A08 + View
Brassica napus C03p92670 C03 - View
Brassica napus A05p35940 A05 - View
Brassica napus C05p54360 C05 - View
Brassica napus A10p13900 A10 + View
Brassica oleracea BolC3t21579H C3 - View
Brassica oleracea BolC5t34104H C5 - View
Brassica oleracea BolC9t57664H C9 + View
Brassica rapa BraA10t43483Z A10 + View
Brassica rapa BraA05t22400Z A05 - View
Beta vulgaris EL10Ac4g10387 PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) Chr4_EL10_PGA_scaffold1 - View
Cannabis sativa CANSAT11G1371 NC_044377.1 + View
Corylus avellana Haze_22940 Protein of unknown function 6 + View
Coffea canephora Cc01_g00080 Protein of Unknown Function (DUF239) chr1 - View
Citrus clementina Ciclev10015338m.g scaffold_2 + View
Carpinus fangiana Cfa009561 Cfa04 + View
Cardamine hirsuta CARHR045020 Protein of Unknown Function (DUF239) Chr1 - View
Cardamine hirsuta CARHR088180 Protein of Unknown Function (DUF239) Chr3 + View
Cardamine hirsuta CARHR270180 Protein of Unknown Function (DUF239) Chr8 + View
Carya illinoinensis CiPaw.13G177300 PF14365 - Domain of unknown function (DUF4409) (DUF4409) Chr13 - View
Cucumis melo MELO3C014725.2 tRNA-splicing ligase RtcB chr05 + View
Chenopodium quinoa AUR62042627 Protein of unknown function C_Quinoa_Scaffold_3130 + View
Chenopodium quinoa AUR62019162 Protein of unknown function C_Quinoa_Scaffold_3107 + View
Capsella rubella Carub.0008s1701 PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) scaffold_8 + View
Capsella rubella Carub.0003s1298 PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) scaffold_3 + View
Capsella rubella Carub.0001s4387 PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) scaffold_1 - View
Davidia involucrata Dinv13474 GWHABJS00000007 - View
Eucalyptus grandis Eucgr.B03602 Chr02 + View
Eucalyptus grandis Eucgr.J01765 Chr10 + View
Erythranthe guttata Migut.N00554 scaffold_14 + View
Eutrema salsugineum Thhalv10020816m.g PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) scaffold_13 - View
Eutrema salsugineum Thhalv10011520m.g PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) scaffold_7 + View
Eutrema salsugineum Thhalv10013632m.g scaffold_2 - View
Fragaria x ananassa FAN25G1964 PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) Fvb3-1 + View
Fragaria x ananassa FAN21G3267 PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) Fvb3-2 - View
Fragaria x ananassa FAN16G2518 PF14365 - Domain of unknown function (DUF4409) (DUF4409) Fvb3-3 - View
Fragaria x ananassa FAN11G2526 PF14365 - Domain of unknown function (DUF4409) (DUF4409) Fvb3-4 + View
Fragaria vesca FvH4_3g45750 PF14365 - Domain of unknown function (DUF4409) (DUF4409) Fvb3 - View
Lactuca sativa Lsat_1_v5_gn_2_49961 PF14365 - Domain of unknown function (DUF4409) (DUF4409) Lsat_1_v8_lg_2 + View
Malus domestica MD03G1003500 Protein of Unknown Function (DUF239) Chr03 + View
Malus domestica MD11G1003400 Protein of Unknown Function (DUF239) Chr11 + View
Manihot esculenta Manes.03G087500 Chromosome03 + View
Manihot esculenta Manes.15G109300 Chromosome15 - View
Nelumbo nucifera Nn2g15860 chr2 - View
Punica granatum PGR102G1545 NC_045129.1 - View
Punica granatum PGR119G0659 NC_045132.1 + View
Prunus persica Prupe.6G003200 PF03080 - Domain of unknown function (DUF239) (DUF239) Pp06 + View
Populus trichocarpa Potri.001G003800 PF03080 - Domain of unknown function (DUF239) (DUF239) Chr01 + View
Populus trichocarpa Potri.003G221200 PF03080 - Domain of unknown function (DUF239) (DUF239) Chr03 - View
Phaseolus vulgaris Phvul.008G235200 PF14365 - Domain of unknown function (DUF4409) (DUF4409) Chr08 + View
Rosa chinensis RcHm_v2.0_Chr5g0083821 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim13G0232800 chr13 - View
Striga asiatica SGA_v2.0_scaffold6G03306 scaffold6 + View
Salvia bowleyana SalBow3G2594 GWHASIU00000006 + View
Salvia bowleyana SalBow2G2898 GWHASIU00000007 - View
Salix brachista Sabra03G0164700 GWHAAZH00000003 - View
Simmondsia chinensis Sc12g0010000 GWHAASQ00000012 + View
Simmondsia chinensis Sc09g0000070 GWHAASQ00000009 + View
Sechium edule Sed0008749 LG01 - View
Solanum lycopersicum Solyc01g005550.3 DUF239 domain-containing protein/DUF4409 domain-containing protein (AHRD V3.3 *** A0A1Q3BKR6_CEPFO) SL4.0ch01 + View
Schrenkiella parvula Sp1g41040 PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) ch1-2 - View
Schrenkiella parvula Sp3g11720 PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) ch3-1 + View
Schrenkiella parvula Sp6g18320 PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) ch6-6 + View
Solanum pennellii Sopen01g001580 Protein of Unknown Function (DUF239) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant | BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) ., Domain of unknown function DUF239 Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400032123 Conserved gene of unknown function ST4.03ch01 + View
Trochodendron aralioides TAR623G1117 group7 + View
Trochodendron aralioides TAR369G1006 group18 - View
Tarenaya hassleriana THA.LOC104811722 uncharacterized protein LOC104811722 NW_010965372.1 + View
Tarenaya hassleriana THA.LOC104810323 uncharacterized protein LOC104810323 NW_010965216.1 + View
Tarenaya hassleriana THA.LOC104822780 uncharacterized protein LOC104822780 NW_010966725.1 - View
Tripterygium wilfordii TWI60G0062 NC_052246.1 + View
Tripterygium wilfordii TWI34G1713 NC_052235.1 - View
Vitis vinifera GSVIVG01025471001 chr6 + View