Gene: AT1G55360

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G55360
  • Transcript Identifier AT1G55360.1
  • Gene Type Coding gene
  • Location Chr1 : 20666526-20668502 : negative

Gene Family Information

  • ID HOM05D000111
  • #Genes/#Species 3048/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G55360.1
  • uniprot Q9C8A7

Descriptions

  • Description tRNA-splicing ligase (DUF239)
  • Computational description Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT3G13510.1); Has 753 Blast hits to 700 proteins in 28 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 10; Plants - 728; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016874
IEA
GOA Databaseligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
Gene Ontologyextracellular region

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR025521 Neprosin activation peptide
IPR004314 Neprosin
Mapman id Description
35.1 not assigned.annotated