Functional clusters

Information

  • Type InterPro
  • Description Protein PCF11-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr8 5 CH_acertr_805 2 2 0.000211491
Actinidia chinensis Lachesis_group0 5 CH_ach_562 2 2 0.000543213
Amaranthus hybridus AmaHy_arrow1_Scaffold_9 5 CH_amhyb_439 2 3 0.000757523
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 5 CH_arhy_653 3 3 0.00000178815
Corylus avellana 10 5 CH_cav_749 2 2 0.000460017
Ceratophyllum demersum 9 5 CH_cde_91 4 16 0.000000187941
Davidia involucrata GWHABJS00000021 5 CH_din_770 2 2 0.000500125
Gossypium hirsutum D04 5 CH_ghi_115 6 8 3.95059e-18
Gossypium hirsutum A04 5 CH_ghi_557 3 4 0.000000705787
Glycine max Gm10 5 CH_gma_962 2 2 0.00079707
Glycine max Gm19 5 CH_gma_963 2 2 0.00079707
Gossypium raimondii Chr09 5 CH_gra_260 3 5 0.000000172435
Hydrangea macrophylla Hma1.2p1_0084F.1 5 CH_hma_485 2 2 0.000111086
Lupinus albus Lalb_Chr25 5 CH_lal_229 3 3 0.000000347064
Lotus japonicus chr1 5 CH_lja_550 2 2 0.000429046
Lonicera japonica GWHAAZE00000002 5 CH_lonja_1097 2 2 0.000359324
Physcomitrium patens Chr16 5 CH_ppa_285 2 4 0.000367613
Phaseolus vulgaris Chr07 5 CH_pvu_639 2 2 0.000440836
Salix brachista GWHAAZH00000017 5 CH_sbr_105 6 21 0.00000000000111796
Sequoiadendron giganteum chr10 5 CH_sgi_2152 2 2 0.000146145
Sapria himalayana scaffold3_21451142 5 CH_shi_525 2 3 0.000514599
Theobroma cacao Chromosome_5 5 CH_tca_703 2 2 0.000439432
Utricularia gibba unitig_0 5 CH_ugi_353 2 2 0.000492287
Utricularia gibba unitig_749 5 CH_ugi_354 2 2 0.000492287
Vigna mungo CM024071.1 5 CH_vmu_607 2 2 0.000646141
Vanilla planifolia CM028150.1 5 CH_vpl_450 2 2 0.000073888
Acer truncatum chr8 6 CH_acertr_805 2 2 0.000211491
Actinidia chinensis Lachesis_group0 6 CH_ach_562 2 2 0.000543213
Amaranthus hybridus AmaHy_arrow1_Scaffold_9 6 CH_amhyb_439 2 3 0.000757523
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 6 CH_arhy_653 3 3 0.00000178815
Corylus avellana 10 6 CH_cav_749 2 2 0.000460017
Ceratophyllum demersum 9 6 CH_cde_91 4 16 0.000000187941
Davidia involucrata GWHABJS00000021 6 CH_din_770 2 2 0.000500125
Gossypium hirsutum D04 6 CH_ghi_115 6 8 3.95059e-18
Gossypium hirsutum A04 6 CH_ghi_557 3 4 0.000000705787
Glycine max Gm10 6 CH_gma_962 2 2 0.00079707
Glycine max Gm19 6 CH_gma_963 2 2 0.00079707
Gossypium raimondii Chr09 6 CH_gra_260 3 5 0.000000172435
Hydrangea macrophylla Hma1.2p1_0084F.1 6 CH_hma_485 2 2 0.000111086
Lupinus albus Lalb_Chr25 6 CH_lal_229 3 3 0.000000347064
Lotus japonicus chr1 6 CH_lja_550 2 2 0.000429046
Lonicera japonica GWHAAZE00000002 6 CH_lonja_1097 2 2 0.000359324
Physcomitrium patens Chr16 6 CH_ppa_285 2 4 0.000367613
Phaseolus vulgaris Chr07 6 CH_pvu_639 2 2 0.000440836
Salix brachista GWHAAZH00000017 6 CH_sbr_105 6 21 0.00000000000111796
Sequoiadendron giganteum chr10 6 CH_sgi_2152 2 2 0.000146145
Sapria himalayana scaffold3_21451142 6 CH_shi_525 2 3 0.000514599
Theobroma cacao Chromosome_5 6 CH_tca_703 2 2 0.000439432
Utricularia gibba unitig_0 6 CH_ugi_353 2 2 0.000492287
Utricularia gibba unitig_749 6 CH_ugi_354 2 2 0.000492287
Vigna mungo CM024071.1 6 CH_vmu_607 2 2 0.000646141
Vanilla planifolia CM028150.1 6 CH_vpl_450 2 2 0.000073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001