Functional clusters
Information
- Type InterPro
- Description Enhancer of mRNA-decapping protein 4-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_14 | 5 | CH_amhyb_90 | 3 | 4 | 0.0000000425127 |
| Aquilegia oxysepala | CHR07 | 5 | CH_aox_171 | 3 | 3 | 0.000000337686 |
| Ceratophyllum demersum | 8 | 5 | CH_cde_366 | 2 | 2 | 0.000236939 |
| Capsella rubella | scaffold_3 | 5 | CH_cru_473 | 2 | 2 | 0.0000731154 |
| Fragaria vesca | Fvb3 | 5 | CH_fve_144 | 5 | 11 | 0.0000000000330173 |
| Fragaria vesca | Fvb4 | 5 | CH_fve_445 | 3 | 4 | 0.00000458003 |
| Gossypium hirsutum | D09 | 5 | CH_ghi_430 | 3 | 3 | 0.0000000374316 |
| Lupinus albus | Lalb_Chr15 | 5 | CH_lal_794 | 2 | 2 | 0.000787236 |
| Magnolia biondii | Chr15 | 5 | CH_mbi_235 | 4 | 6 | 0.000000000360789 |
| Punica granatum | NC_045133.1 | 5 | CH_pgr_93 | 5 | 13 | 0.00000000000183536 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 5 | CH_rch_203 | 7 | 32 | 0.0000000000000434878 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 5 | CH_rch_211 | 8 | 74 | 0.0000000000000570299 |
| Sequoiadendron giganteum | chr7 | 5 | CH_sgi_2500 | 2 | 2 | 0.000487151 |
| Sequoiadendron giganteum | chr4 | 5 | CH_sgi_2501 | 2 | 2 | 0.000487151 |
| Sapria himalayana | scaffold27_7528638 | 5 | CH_shi_159 | 3 | 7 | 0.000000171639 |
| Utricularia gibba | unitig_8 | 5 | CH_ugi_292 | 2 | 2 | 0.000246144 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_14 | 6 | CH_amhyb_90 | 3 | 4 | 0.0000000425127 |
| Aquilegia oxysepala | CHR07 | 6 | CH_aox_171 | 3 | 3 | 0.000000337686 |
| Ceratophyllum demersum | 8 | 6 | CH_cde_366 | 2 | 2 | 0.000236939 |
| Capsella rubella | scaffold_3 | 6 | CH_cru_473 | 2 | 2 | 0.0000731154 |
| Fragaria x ananassa | Fvb3-2 | 6 | CH_fan_761 | 4 | 61 | 0.0000477074 |
| Fragaria x ananassa | Fvb3-1 | 6 | CH_fan_820 | 3 | 11 | 0.0000965062 |
| Fragaria vesca | Fvb3 | 6 | CH_fve_144 | 5 | 11 | 0.0000000000330173 |
| Fragaria vesca | Fvb4 | 6 | CH_fve_445 | 3 | 4 | 0.00000458003 |
| Gossypium hirsutum | D09 | 6 | CH_ghi_430 | 3 | 3 | 0.0000000374316 |
| Lupinus albus | Lalb_Chr15 | 6 | CH_lal_794 | 2 | 2 | 0.000787236 |
| Magnolia biondii | Chr15 | 6 | CH_mbi_235 | 4 | 6 | 0.000000000360789 |
| Punica granatum | NC_045133.1 | 6 | CH_pgr_93 | 5 | 13 | 0.00000000000183536 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 6 | CH_rch_203 | 7 | 32 | 0.0000000000000434878 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 6 | CH_rch_211 | 8 | 74 | 0.0000000000000570299 |
| Sequoiadendron giganteum | chr7 | 6 | CH_sgi_2500 | 2 | 2 | 0.000487151 |
| Sequoiadendron giganteum | chr4 | 6 | CH_sgi_2501 | 2 | 2 | 0.000487151 |
| Sapria himalayana | scaffold27_7528638 | 6 | CH_shi_159 | 3 | 7 | 0.000000171639 |
| Utricularia gibba | unitig_8 | 6 | CH_ugi_292 | 2 | 2 | 0.000246144 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |