Functional clusters

Information

  • Type InterPro
  • Description Transcription elongation regulator 1-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00029 5 CH_atr_425 2 2 0.0000794407
Cicer arietinum L. Ca_LG1_v3 5 CH_car_234 2 2 0.0000778301
Ceratophyllum demersum 2 5 CH_cde_365 2 2 0.000236939
Malus domestica Chr13 5 CH_mdo_1020 2 2 0.000113763
Nicotiana tabacum Nitab4.5_0000129 5 CH_nta_233 2 2 0.000109727
Pisum sativum chr7LG7 5 CH_psa_574 2 2 0.00015649
Quercus lobata 3 5 CH_qlo_1428 2 3 0.000154883
Sequoiadendron giganteum chr10 5 CH_sgi_834 3 3 0.00000000355983
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_512 2 2 0.0000929238
Amborella trichopoda AmTr_v1.0_scaffold00029 6 CH_atr_425 2 2 0.0000794407
Cicer arietinum L. Ca_LG1_v3 6 CH_car_234 2 2 0.0000778301
Ceratophyllum demersum 2 6 CH_cde_365 2 2 0.000236939
Malus domestica Chr13 6 CH_mdo_1020 2 2 0.000113763
Nicotiana tabacum Nitab4.5_0000129 6 CH_nta_233 2 2 0.000109727
Pisum sativum chr7LG7 6 CH_psa_574 2 2 0.00015649
Quercus lobata 3 6 CH_qlo_1428 2 3 0.000154883
Sequoiadendron giganteum chr10 6 CH_sgi_834 3 3 0.00000000355983
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_512 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001