Functional clusters

Information

  • Type InterPro
  • Description Aladin

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00101 5 CH_atr_424 2 2 0.0000794407
Lupinus albus Lalb_Chr22 5 CH_lal_426 2 2 0.0000524824
Lonicera japonica GWHAAZE00000001 5 CH_lonja_958 2 2 0.000179662
Malus domestica Chr14 5 CH_mdo_1019 2 2 0.000113763
Quercus lobata 7 5 CH_qlo_1299 2 2 0.0000516289
Rosa chinensis RcHm_v2.0_Chr1 5 CH_rch_1003 2 2 0.0000398653
Solanum lycopersicum SL4.0ch08 5 CH_sly_421 3 16 0.00000289277
Trochodendron aralioides group7 5 CH_tar_623 2 3 0.000180104
Vitis vinifera chr8 5 CH_vvi_533 2 2 0.000076063
Amborella trichopoda AmTr_v1.0_scaffold00101 6 CH_atr_424 2 2 0.0000794407
Lupinus albus Lalb_Chr22 6 CH_lal_426 2 2 0.0000524824
Lonicera japonica GWHAAZE00000001 6 CH_lonja_958 2 2 0.000179662
Malus domestica Chr14 6 CH_mdo_1019 2 2 0.000113763
Quercus lobata 7 6 CH_qlo_1299 2 2 0.0000516289
Rosa chinensis RcHm_v2.0_Chr1 6 CH_rch_1003 2 2 0.0000398653
Solanum lycopersicum SL4.0ch08 6 CH_sly_421 3 16 0.00000289277
Trochodendron aralioides group7 6 CH_tar_623 2 3 0.000180104
Vitis vinifera chr8 6 CH_vvi_533 2 2 0.000076063

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001