Functional clusters

Information

  • Type InterPro
  • Description Aminotransferase ALAT1/2-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group27 5 CH_ach_560 2 2 0.000543213
Avicennia marina ScioBoG_14204_HRSCAF_14270 5 CH_ama_245 2 2 0.000862218
Amaranthus hybridus AmaHy_arrow1_Scaffold_15 5 CH_amhyb_341 2 2 0.000252525
Arabidopsis thaliana Chr1 5 CH_ath_525 2 2 0.000286492
Brassica oleracea C8 5 CH_bol_180 4 7 0.00000000667033
Capsicum annuum PGAv.1.6.scaffold790 5 CH_can_869 2 2 0.000826105
Coffea canephora chr4 5 CH_ccan_591 2 8 0.000357741
Chenopodium quinoa C_Quinoa_Scaffold_1677 5 CH_cqu_1087 2 2 0.000995025
Chenopodium quinoa C_Quinoa_Scaffold_2716 5 CH_cqu_384 3 4 0.000000471431
Davidia involucrata GWHABJS00000018 5 CH_din_769 2 2 0.000500125
Nelumbo nucifera chr4 5 CH_nnu_573 2 2 0.000481684
Olea europaea chr18 5 CH_oeu_699 2 2 0.000800683
Olea europaea chr1 5 CH_oeu_700 2 2 0.000800683
Sequoiadendron giganteum chr6 5 CH_sgi_160 7 8 6.73834e-23
Sapria himalayana scaffold48_4099315 5 CH_shi_356 2 2 0.0000571804
Solanum lycopersicum SL4.0ch03 5 CH_sly_910 2 2 0.000586941
Solanum pennellii Spenn-ch03 5 CH_spe_812 2 2 0.00044479
Vanilla planifolia CM028154.1 5 CH_vpl_222 3 8 0.00000183384
Actinidia chinensis Lachesis_group27 6 CH_ach_560 2 2 0.000543213
Avicennia marina ScioBoG_14204_HRSCAF_14270 6 CH_ama_245 2 2 0.000862218
Amaranthus hybridus AmaHy_arrow1_Scaffold_15 6 CH_amhyb_341 2 2 0.000252525
Arabidopsis thaliana Chr1 6 CH_ath_525 2 2 0.000286492
Brassica oleracea C8 6 CH_bol_180 4 7 0.00000000667033
Capsicum annuum PGAv.1.6.scaffold790 6 CH_can_869 2 2 0.000826105
Coffea canephora chr4 6 CH_ccan_591 2 8 0.000357741
Chenopodium quinoa C_Quinoa_Scaffold_1677 6 CH_cqu_1087 2 2 0.000995025
Chenopodium quinoa C_Quinoa_Scaffold_2716 6 CH_cqu_384 3 4 0.000000471431
Davidia involucrata GWHABJS00000018 6 CH_din_769 2 2 0.000500125
Nelumbo nucifera chr4 6 CH_nnu_573 2 2 0.000481684
Olea europaea chr18 6 CH_oeu_699 2 2 0.000800683
Olea europaea chr1 6 CH_oeu_700 2 2 0.000800683
Sequoiadendron giganteum chr6 6 CH_sgi_160 7 8 6.73834e-23
Sapria himalayana scaffold48_4099315 6 CH_shi_356 2 2 0.0000571804
Solanum lycopersicum SL4.0ch03 6 CH_sly_910 2 2 0.000586941
Solanum pennellii Spenn-ch03 6 CH_spe_812 2 2 0.00044479
Vanilla planifolia CM028154.1 6 CH_vpl_222 3 8 0.00000183384

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001