Functional clusters
Information
- Type InterPro
- Description Multicopper oxidase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-6 | 5 | CH_aar_260 | 3 | 3 | 0.0000891475 |
| Acer truncatum | chr3 | 5 | CH_acertr_485 | 4 | 8 | 0.0000268643 |
| Acer truncatum | chr1 | 5 | CH_acertr_703 | 3 | 3 | 0.000206653 |
| Arabidopsis lyrata | scaffold_6 | 5 | CH_aly_562 | 3 | 4 | 0.000299792 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_1 | 5 | CH_amhyb_123 | 4 | 6 | 0.000000636402 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 5 | CH_arhy_1054 | 3 | 3 | 0.000244834 |
| Brassica carinata | ChrB08 | 5 | CH_bca_619 | 4 | 4 | 0.000000274917 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 5 | CH_bvu_324 | 3 | 3 | 0.0000509994 |
| Beta vulgaris | Chr7_EL10_PGA_scaffold5 | 5 | CH_bvu_325 | 3 | 3 | 0.0000509994 |
| Camellia sinensis var. sinensis | Chr4 | 5 | CH_camsi_39 | 11 | 16 | 4.64782e-23 |
| Capsicum annuum | PGAv.1.6.scaffold229 | 5 | CH_can_532 | 3 | 3 | 0.0000795428 |
| Corylus avellana | 7 | 5 | CH_cav_13 | 18 | 49 | 2.92549e-31 |
| Ceratophyllum demersum | 7 | 5 | CH_cde_144 | 4 | 8 | 0.00000421784 |
| Ceratophyllum demersum | 4 | 5 | CH_cde_176 | 3 | 3 | 0.000051052 |
| Carpinus fangiana | Cfa05 | 5 | CH_cfa_304 | 4 | 5 | 0.00000296084 |
| Carya illinoinensis | Chr15 | 5 | CH_cil_5 | 21 | 23 | 9.39316e-51 |
| Citrullus lanatus | CG_Chr02 | 5 | CH_cla_253 | 3 | 3 | 0.000156347 |
| Davidia involucrata | GWHABJS00000002 | 5 | CH_din_152 | 6 | 10 | 0.000000000408438 |
| Davidia involucrata | GWHABJS00000016 | 5 | CH_din_189 | 5 | 6 | 0.00000000633603 |
| Davidia involucrata | GWHABJS00000011 | 5 | CH_din_65 | 9 | 18 | 5.47619e-16 |
| Eucalyptus grandis | Chr06 | 5 | CH_egr_373 | 7 | 8 | 0.000000000000752851 |
| Glycine max | Gm08 | 5 | CH_gma_208 | 5 | 5 | 0.00000000117204 |
| Helianthus annuus | HanXRQChr12 | 5 | CH_han_171 | 6 | 6 | 0.000000000000848097 |
| Helianthus annuus | HanXRQChr10 | 5 | CH_han_962 | 3 | 3 | 0.00022124 |
| Lotus japonicus | chr5 | 5 | CH_lja_91 | 5 | 5 | 0.000000000460745 |
| Lonicera japonica | GWHAAZE00000007 | 5 | CH_lonja_1102 | 3 | 3 | 0.000425438 |
| Lonicera japonica | GWHAAZE00000004 | 5 | CH_lonja_165 | 7 | 7 | 0.0000000000000105359 |
| Lonicera japonica | GWHAAZE00000007 | 5 | CH_lonja_187 | 7 | 8 | 0.0000000000000841254 |
| Lonicera japonica | GWHAAZE00000008 | 5 | CH_lonja_318 | 9 | 65 | 0.00000000138697 |
| Magnolia biondii | Chr14 | 5 | CH_mbi_55 | 10 | 27 | 2.83107e-19 |
| Malus domestica | Chr12 | 5 | CH_mdo_1038 | 4 | 11 | 0.000142948 |
| Malus domestica | Chr10 | 5 | CH_mdo_273 | 5 | 5 | 0.000000000721326 |
| Nelumbo nucifera | chr1 | 5 | CH_nnu_215 | 4 | 4 | 0.000000213044 |
| Nelumbo nucifera | chr3 | 5 | CH_nnu_340 | 5 | 26 | 0.0000197448 |
| Olea europaea | scaffold1252 | 5 | CH_oeu_197 | 4 | 5 | 0.00000127115 |
| Olea europaea | chr14 | 5 | CH_oeu_84 | 5 | 6 | 0.0000000023614 |
| Punica granatum | NC_045129.1 | 5 | CH_pgr_75 | 7 | 8 | 0.000000000000108849 |
| Quercus lobata | 4 | 5 | CH_qlo_1629 | 4 | 11 | 0.000392663 |
| Quercus lobata | CM012294 | 5 | CH_qlo_17 | 26 | 75 | 5.88919e-46 |
| Quercus lobata | CM012294 | 5 | CH_qlo_608 | 5 | 5 | 0.00000000276989 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 5 | CH_rch_353 | 9 | 60 | 0.000000000193806 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 5 | CH_rch_400 | 9 | 71 | 0.000000000959135 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 5 | CH_rch_683 | 4 | 4 | 0.000000686613 |
| Salvia bowleyana | GWHASIU00000002 | 5 | CH_sbo_235 | 6 | 12 | 0.0000000024992 |
| Salvia bowleyana | GWHASIU00000002 | 5 | CH_sbo_53 | 11 | 16 | 2.6731e-22 |
| Simmondsia chinensis | GWHAASQ00000009 | 5 | CH_sci_263 | 3 | 3 | 0.0000711727 |
| Sequoiadendron giganteum | chr2 | 5 | CH_sgi_141 | 12 | 14 | 5.66267e-24 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_1528 | 4 | 5 | 0.0000265145 |
| Sequoiadendron giganteum | chr6 | 5 | CH_sgi_472 | 11 | 51 | 0.000000000000851365 |
| Sequoiadendron giganteum | chr2 | 5 | CH_sgi_587 | 7 | 10 | 0.0000000000224974 |
| Sequoiadendron giganteum | chr2 | 5 | CH_sgi_669 | 8 | 22 | 0.000000000188156 |
| Sapria himalayana | scaffold9_16683904 | 5 | CH_shi_447 | 3 | 7 | 0.000263894 |
| Solanum lycopersicum | SL4.0ch05 | 5 | CH_sly_214 | 5 | 6 | 0.00000000244431 |
| Solanum lycopersicum | SL4.0ch06 | 5 | CH_sly_667 | 3 | 3 | 0.000159453 |
| Solanum pennellii | Spenn-ch09 | 5 | CH_spe_594 | 3 | 3 | 0.0000736094 |
| Trochodendron aralioides | group7 | 5 | CH_tar_606 | 3 | 3 | 0.000166831 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 5 | CH_tpr_560 | 4 | 18 | 0.000182252 |
| Utricularia gibba | unitig_26 | 5 | CH_ugi_25 | 5 | 10 | 0.00000000173822 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_13 | 11 | 15 | 2.72301e-21 |
| Vigna mungo | CM024070.1 | 5 | CH_vmu_560 | 3 | 4 | 0.000490419 |
| Vanilla planifolia | CM028157.1 | 5 | CH_vpl_360 | 3 | 3 | 0.0000636321 |
| Vanilla planifolia | CM028155.1 | 5 | CH_vpl_361 | 3 | 3 | 0.0000636321 |
| Vitis vinifera | chr18 | 5 | CH_vvi_100 | 13 | 72 | 0.00000000000000995086 |
| Aethionema arabicum | LG-6 | 6 | CH_aar_260 | 3 | 3 | 0.0000891475 |
| Acer truncatum | chr3 | 6 | CH_acertr_485 | 4 | 8 | 0.0000268643 |
| Acer truncatum | chr1 | 6 | CH_acertr_703 | 3 | 3 | 0.000206653 |
| Arabidopsis lyrata | scaffold_6 | 6 | CH_aly_562 | 3 | 4 | 0.000299792 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_1 | 6 | CH_amhyb_123 | 4 | 6 | 0.000000636402 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 6 | CH_arhy_1054 | 3 | 3 | 0.000244834 |
| Brassica carinata | ChrB08 | 6 | CH_bca_619 | 4 | 4 | 0.000000274917 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 6 | CH_bvu_324 | 3 | 3 | 0.0000509994 |
| Beta vulgaris | Chr7_EL10_PGA_scaffold5 | 6 | CH_bvu_325 | 3 | 3 | 0.0000509994 |
| Camellia sinensis var. sinensis | Chr4 | 6 | CH_camsi_39 | 11 | 16 | 4.64782e-23 |
| Capsicum annuum | PGAv.1.6.scaffold229 | 6 | CH_can_532 | 3 | 3 | 0.0000795428 |
| Corylus avellana | 7 | 6 | CH_cav_13 | 18 | 49 | 2.92549e-31 |
| Ceratophyllum demersum | 7 | 6 | CH_cde_144 | 4 | 8 | 0.00000421784 |
| Ceratophyllum demersum | 4 | 6 | CH_cde_176 | 3 | 3 | 0.000051052 |
| Carpinus fangiana | Cfa05 | 6 | CH_cfa_304 | 4 | 5 | 0.00000296084 |
| Carya illinoinensis | Chr15 | 6 | CH_cil_5 | 21 | 23 | 9.39316e-51 |
| Citrullus lanatus | CG_Chr02 | 6 | CH_cla_253 | 3 | 3 | 0.000156347 |
| Davidia involucrata | GWHABJS00000002 | 6 | CH_din_152 | 6 | 10 | 0.000000000408438 |
| Davidia involucrata | GWHABJS00000016 | 6 | CH_din_189 | 5 | 6 | 0.00000000633603 |
| Davidia involucrata | GWHABJS00000011 | 6 | CH_din_65 | 9 | 18 | 5.47619e-16 |
| Eucalyptus grandis | Chr06 | 6 | CH_egr_373 | 7 | 8 | 0.000000000000752851 |
| Fragaria x ananassa | Fvb2-3 | 6 | CH_fan_163 | 6 | 8 | 0.000000000119271 |
| Fragaria x ananassa | Fvb5-3 | 6 | CH_fan_666 | 7 | 77 | 0.0000166738 |
| Glycine max | Gm08 | 6 | CH_gma_208 | 5 | 5 | 0.00000000117204 |
| Helianthus annuus | HanXRQChr12 | 6 | CH_han_171 | 6 | 6 | 0.000000000000848097 |
| Helianthus annuus | HanXRQChr10 | 6 | CH_han_962 | 3 | 3 | 0.00022124 |
| Lotus japonicus | chr5 | 6 | CH_lja_91 | 5 | 5 | 0.000000000460745 |
| Lonicera japonica | GWHAAZE00000007 | 6 | CH_lonja_1102 | 3 | 3 | 0.000425438 |
| Lonicera japonica | GWHAAZE00000004 | 6 | CH_lonja_165 | 7 | 7 | 0.0000000000000105359 |
| Lonicera japonica | GWHAAZE00000007 | 6 | CH_lonja_187 | 7 | 8 | 0.0000000000000841254 |
| Lonicera japonica | GWHAAZE00000008 | 6 | CH_lonja_318 | 9 | 65 | 0.00000000138697 |
| Magnolia biondii | Chr14 | 6 | CH_mbi_55 | 10 | 27 | 2.83107e-19 |
| Malus domestica | Chr12 | 6 | CH_mdo_1038 | 4 | 11 | 0.000142948 |
| Malus domestica | Chr10 | 6 | CH_mdo_273 | 5 | 5 | 0.000000000721326 |
| Nelumbo nucifera | chr1 | 6 | CH_nnu_215 | 4 | 4 | 0.000000213044 |
| Nelumbo nucifera | chr3 | 6 | CH_nnu_340 | 5 | 26 | 0.0000197448 |
| Olea europaea | scaffold1252 | 6 | CH_oeu_197 | 4 | 5 | 0.00000127115 |
| Olea europaea | chr14 | 6 | CH_oeu_84 | 5 | 6 | 0.0000000023614 |
| Punica granatum | NC_045129.1 | 6 | CH_pgr_75 | 7 | 8 | 0.000000000000108849 |
| Quercus lobata | 4 | 6 | CH_qlo_1629 | 4 | 11 | 0.000392663 |
| Quercus lobata | CM012294 | 6 | CH_qlo_17 | 26 | 75 | 5.88919e-46 |
| Quercus lobata | CM012294 | 6 | CH_qlo_608 | 5 | 5 | 0.00000000276989 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 6 | CH_rch_353 | 9 | 60 | 0.000000000193806 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 6 | CH_rch_400 | 9 | 71 | 0.000000000959135 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 6 | CH_rch_683 | 4 | 4 | 0.000000686613 |
| Salvia bowleyana | GWHASIU00000002 | 6 | CH_sbo_235 | 6 | 12 | 0.0000000024992 |
| Salvia bowleyana | GWHASIU00000002 | 6 | CH_sbo_53 | 11 | 16 | 2.6731e-22 |
| Simmondsia chinensis | GWHAASQ00000009 | 6 | CH_sci_263 | 3 | 3 | 0.0000711727 |
| Sequoiadendron giganteum | chr2 | 6 | CH_sgi_141 | 12 | 14 | 5.66267e-24 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_1528 | 4 | 5 | 0.0000265145 |
| Sequoiadendron giganteum | chr6 | 6 | CH_sgi_472 | 11 | 51 | 0.000000000000851365 |
| Sequoiadendron giganteum | chr2 | 6 | CH_sgi_587 | 7 | 10 | 0.0000000000224974 |
| Sequoiadendron giganteum | chr2 | 6 | CH_sgi_669 | 8 | 22 | 0.000000000188156 |
| Sapria himalayana | scaffold9_16683904 | 6 | CH_shi_447 | 3 | 7 | 0.000263894 |
| Solanum lycopersicum | SL4.0ch05 | 6 | CH_sly_214 | 5 | 6 | 0.00000000244431 |
| Solanum lycopersicum | SL4.0ch06 | 6 | CH_sly_667 | 3 | 3 | 0.000159453 |
| Solanum pennellii | Spenn-ch09 | 6 | CH_spe_594 | 3 | 3 | 0.0000736094 |
| Trochodendron aralioides | group7 | 6 | CH_tar_606 | 3 | 3 | 0.000166831 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 6 | CH_tpr_560 | 4 | 18 | 0.000182252 |
| Utricularia gibba | unitig_26 | 6 | CH_ugi_25 | 5 | 10 | 0.00000000173822 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_13 | 11 | 15 | 2.72301e-21 |
| Vigna mungo | CM024070.1 | 6 | CH_vmu_560 | 3 | 4 | 0.000490419 |
| Vanilla planifolia | CM028157.1 | 6 | CH_vpl_360 | 3 | 3 | 0.0000636321 |
| Vanilla planifolia | CM028155.1 | 6 | CH_vpl_361 | 3 | 3 | 0.0000636321 |
| Vitis vinifera | chr18 | 6 | CH_vvi_100 | 13 | 72 | 0.00000000000000995086 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |