Functional clusters
Information
- Type InterPro
- Description DNA2/NAM7-like helicase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr11 | 5 | CH_acertr_33 | 7 | 8 | 2.67644e-17 |
| Acer truncatum | chr11 | 5 | CH_acertr_936 | 3 | 7 | 0.000526866 |
| Actinidia chinensis | Lachesis_group20 | 5 | CH_ach_195 | 3 | 3 | 0.0000042891 |
| Arabidopsis lyrata | scaffold_7 | 5 | CH_aly_117 | 5 | 10 | 0.000000000107579 |
| Aquilegia oxysepala | CHR03 | 5 | CH_aox_24 | 6 | 6 | 0.00000000000000138634 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.17 | 5 | CH_arhy_114 | 7 | 7 | 2.42298e-19 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.07 | 5 | CH_arhy_392 | 4 | 4 | 0.00000000329427 |
| Arabidopsis thaliana | Chr5 | 5 | CH_ath_233 | 5 | 64 | 0.000000236195 |
| Brassica carinata | ChrC02 | 5 | CH_bca_421 | 4 | 6 | 0.0000000138245 |
| Camellia sinensis var. sinensis | Chr6 | 5 | CH_camsi_1134 | 3 | 6 | 0.000184271 |
| Cannabis sativa | NC_044373.1 | 5 | CH_cansat_106 | 6 | 36 | 0.0000000000912274 |
| Cicer arietinum L. | Ca_LG6_v3 | 5 | CH_car_115 | 3 | 3 | 0.0000014993 |
| Corylus avellana | 11 | 5 | CH_cav_240 | 4 | 8 | 0.00000017199 |
| Corylus avellana | 5 | 5 | CH_cav_584 | 3 | 7 | 0.000172541 |
| Chara braunii | BFEA01000054 | 5 | CH_cbr_146 | 3 | 5 | 0.0000221815 |
| Citrus clementina | scaffold_4 | 5 | CH_ccl_137 | 5 | 5 | 0.000000000002102 |
| Ceratophyllum demersum | 9 | 5 | CH_cde_183 | 3 | 5 | 0.00006357 |
| Carpinus fangiana | Cfa03 | 5 | CH_cfa_164 | 4 | 4 | 0.00000000310192 |
| Carica papaya | supercontig_108 | 5 | CH_cpa_54 | 5 | 8 | 0.000000000149668 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2933 | 5 | CH_cqu_269 | 4 | 5 | 0.0000000169497 |
| Capsella rubella | scaffold_7 | 5 | CH_cru_426 | 3 | 6 | 0.0000583198 |
| Daucus carota | DCARv2_Chr9 | 5 | CH_dca_104 | 5 | 8 | 0.000000000107618 |
| Davidia involucrata | GWHABJS00000012 | 5 | CH_din_9 | 10 | 10 | 4.53915e-29 |
| Erigeron canadensis | Conyza_canadensis_scaffold:6 | 5 | CH_eca_178 | 4 | 5 | 0.00000000246616 |
| Eucalyptus grandis | Chr06 | 5 | CH_egr_268 | 6 | 6 | 0.00000000000000208037 |
| Erythranthe guttata | scaffold_8 | 5 | CH_egut_226 | 4 | 5 | 0.00000000790265 |
| Helianthus annuus | HanXRQChr14 | 5 | CH_han_78 | 7 | 8 | 1.86275e-18 |
| Lotus japonicus | Contig00141 | 5 | CH_lja_32 | 6 | 6 | 5.20815e-16 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 5 | CH_lsa_663 | 3 | 8 | 0.000150694 |
| Magnolia biondii | Chr03 | 5 | CH_mbi_1068 | 3 | 12 | 0.000434869 |
| Malus domestica | Chr08 | 5 | CH_mdo_99 | 6 | 7 | 0.0000000000000058656 |
| Manihot esculenta | Chromosome07 | 5 | CH_mes_386 | 3 | 3 | 0.00000254492 |
| Medicago truncatula | chr5 | 5 | CH_mtr_146 | 7 | 16 | 2.1797e-16 |
| Nicotiana tabacum | Nitab4.5_0001374 | 5 | CH_nta_144 | 3 | 3 | 0.0000101142 |
| Nicotiana tabacum | Nitab4.5_0000181 | 5 | CH_nta_145 | 3 | 3 | 0.0000101142 |
| Nicotiana tabacum | Nitab4.5_0000091 | 5 | CH_nta_57 | 4 | 4 | 0.00000000721454 |
| Oryza sativa ssp. japonica | chr04 | 5 | CH_osa_175 | 4 | 4 | 0.00000000105181 |
| Petunia axillaris | Peaxi162Scf00521 | 5 | CH_pax_359 | 3 | 4 | 0.0000242252 |
| Prunus persica | Pp01 | 5 | CH_ppe_257 | 4 | 4 | 0.00000000226669 |
| Pisum sativum | chr4LG4 | 5 | CH_psa_113 | 5 | 8 | 0.000000000204291 |
| Populus trichocarpa | Chr04 | 5 | CH_ptr_119 | 6 | 9 | 0.000000000000122953 |
| Populus trichocarpa | Chr17 | 5 | CH_ptr_142 | 5 | 5 | 0.00000000000281724 |
| Quercus lobata | 4 | 5 | CH_qlo_253 | 7 | 10 | 2.11676e-16 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 5 | CH_rch_1012 | 3 | 4 | 0.0000428438 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 5 | CH_rch_109 | 10 | 46 | 3.21423e-19 |
| Salix brachista | GWHAAZH00000004 | 5 | CH_sbr_221 | 4 | 6 | 0.0000000267811 |
| Simmondsia chinensis | GWHAASQ00000012 | 5 | CH_sci_486 | 3 | 12 | 0.000681989 |
| Simmondsia chinensis | GWHAASQ00000013 | 5 | CH_sci_79 | 4 | 4 | 0.00000000132411 |
| Sequoiadendron giganteum | chr3 | 5 | CH_sgi_1023 | 4 | 4 | 0.0000000566011 |
| Sequoiadendron giganteum | chr9 | 5 | CH_sgi_1156 | 4 | 5 | 0.000000282767 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_180 | 12 | 47 | 1.69846e-21 |
| Sequoiadendron giganteum | chr3 | 5 | CH_sgi_449 | 6 | 7 | 0.000000000000404506 |
| Sequoiadendron giganteum | chr3 | 5 | CH_sgi_970 | 5 | 11 | 0.0000000266164 |
| Sapria himalayana | scaffold16_12220143 | 5 | CH_shi_210 | 3 | 4 | 0.00000235376 |
| Solanum lycopersicum | SL4.0ch06 | 5 | CH_sly_208 | 4 | 4 | 0.00000000185636 |
| Solanum tuberosum | ST4.03ch03 | 5 | CH_stu_285 | 4 | 7 | 0.0000000141357 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 5 | CH_tpr_388 | 3 | 4 | 0.0000125106 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_566 | 5 | CH_tpr_389 | 3 | 4 | 0.0000125106 |
| Utricularia gibba | unitig_899 | 5 | CH_ugi_80 | 3 | 3 | 0.00000288809 |
| Vaccinium macrocarpon | chr3_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_12 | 9 | 12 | 1.60137e-22 |
| Vitis vinifera | chr16 | 5 | CH_vvi_190 | 4 | 4 | 0.00000000132168 |
| Zea mays | 10 | 5 | CH_zma_280 | 3 | 3 | 0.0000128475 |
| Acer truncatum | chr11 | 6 | CH_acertr_33 | 7 | 8 | 2.67644e-17 |
| Acer truncatum | chr11 | 6 | CH_acertr_936 | 3 | 7 | 0.000526866 |
| Actinidia chinensis | Lachesis_group20 | 6 | CH_ach_195 | 3 | 3 | 0.0000042891 |
| Arabidopsis lyrata | scaffold_7 | 6 | CH_aly_117 | 5 | 10 | 0.000000000107579 |
| Aquilegia oxysepala | CHR03 | 6 | CH_aox_24 | 6 | 6 | 0.00000000000000138634 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.17 | 6 | CH_arhy_114 | 7 | 7 | 2.42298e-19 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.07 | 6 | CH_arhy_392 | 4 | 4 | 0.00000000329427 |
| Arabidopsis thaliana | Chr5 | 6 | CH_ath_233 | 5 | 64 | 0.000000236195 |
| Brassica carinata | ChrC02 | 6 | CH_bca_421 | 4 | 6 | 0.0000000138245 |
| Camellia sinensis var. sinensis | Chr6 | 6 | CH_camsi_1134 | 3 | 6 | 0.000184271 |
| Cannabis sativa | NC_044373.1 | 6 | CH_cansat_106 | 6 | 36 | 0.0000000000912274 |
| Cicer arietinum L. | Ca_LG6_v3 | 6 | CH_car_115 | 3 | 3 | 0.0000014993 |
| Corylus avellana | 11 | 6 | CH_cav_240 | 4 | 8 | 0.00000017199 |
| Corylus avellana | 5 | 6 | CH_cav_584 | 3 | 7 | 0.000172541 |
| Chara braunii | BFEA01000054 | 6 | CH_cbr_146 | 3 | 5 | 0.0000221815 |
| Citrus clementina | scaffold_4 | 6 | CH_ccl_137 | 5 | 5 | 0.000000000002102 |
| Ceratophyllum demersum | 9 | 6 | CH_cde_183 | 3 | 5 | 0.00006357 |
| Carpinus fangiana | Cfa03 | 6 | CH_cfa_164 | 4 | 4 | 0.00000000310192 |
| Carica papaya | supercontig_108 | 6 | CH_cpa_54 | 5 | 8 | 0.000000000149668 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2933 | 6 | CH_cqu_269 | 4 | 5 | 0.0000000169497 |
| Capsella rubella | scaffold_7 | 6 | CH_cru_426 | 3 | 6 | 0.0000583198 |
| Daucus carota | DCARv2_Chr9 | 6 | CH_dca_104 | 5 | 8 | 0.000000000107618 |
| Davidia involucrata | GWHABJS00000012 | 6 | CH_din_9 | 10 | 10 | 4.53915e-29 |
| Erigeron canadensis | Conyza_canadensis_scaffold:6 | 6 | CH_eca_178 | 4 | 5 | 0.00000000246616 |
| Eucalyptus grandis | Chr06 | 6 | CH_egr_268 | 6 | 6 | 0.00000000000000208037 |
| Erythranthe guttata | scaffold_8 | 6 | CH_egut_226 | 4 | 5 | 0.00000000790265 |
| Helianthus annuus | HanXRQChr14 | 6 | CH_han_78 | 7 | 8 | 1.86275e-18 |
| Lotus japonicus | Contig00141 | 6 | CH_lja_32 | 6 | 6 | 5.20815e-16 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 6 | CH_lsa_663 | 3 | 8 | 0.000150694 |
| Magnolia biondii | Chr03 | 6 | CH_mbi_1068 | 3 | 12 | 0.000434869 |
| Malus domestica | Chr08 | 6 | CH_mdo_99 | 6 | 7 | 0.0000000000000058656 |
| Manihot esculenta | Chromosome07 | 6 | CH_mes_386 | 3 | 3 | 0.00000254492 |
| Medicago truncatula | chr5 | 6 | CH_mtr_146 | 7 | 16 | 2.1797e-16 |
| Nicotiana tabacum | Nitab4.5_0001374 | 6 | CH_nta_144 | 3 | 3 | 0.0000101142 |
| Nicotiana tabacum | Nitab4.5_0000181 | 6 | CH_nta_145 | 3 | 3 | 0.0000101142 |
| Nicotiana tabacum | Nitab4.5_0000091 | 6 | CH_nta_57 | 4 | 4 | 0.00000000721454 |
| Oryza sativa ssp. japonica | chr04 | 6 | CH_osa_175 | 4 | 4 | 0.00000000105181 |
| Petunia axillaris | Peaxi162Scf00521 | 6 | CH_pax_359 | 3 | 4 | 0.0000242252 |
| Prunus persica | Pp01 | 6 | CH_ppe_257 | 4 | 4 | 0.00000000226669 |
| Pisum sativum | chr4LG4 | 6 | CH_psa_113 | 5 | 8 | 0.000000000204291 |
| Populus trichocarpa | Chr04 | 6 | CH_ptr_119 | 6 | 9 | 0.000000000000122953 |
| Populus trichocarpa | Chr17 | 6 | CH_ptr_142 | 5 | 5 | 0.00000000000281724 |
| Quercus lobata | 4 | 6 | CH_qlo_253 | 7 | 10 | 2.11676e-16 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 6 | CH_rch_1012 | 3 | 4 | 0.0000428438 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 6 | CH_rch_109 | 10 | 46 | 3.21423e-19 |
| Salix brachista | GWHAAZH00000004 | 6 | CH_sbr_221 | 4 | 6 | 0.0000000267811 |
| Simmondsia chinensis | GWHAASQ00000012 | 6 | CH_sci_486 | 3 | 12 | 0.000681989 |
| Simmondsia chinensis | GWHAASQ00000013 | 6 | CH_sci_79 | 4 | 4 | 0.00000000132411 |
| Sequoiadendron giganteum | chr3 | 6 | CH_sgi_1023 | 4 | 4 | 0.0000000566011 |
| Sequoiadendron giganteum | chr9 | 6 | CH_sgi_1156 | 4 | 5 | 0.000000282767 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_180 | 12 | 47 | 1.69846e-21 |
| Sequoiadendron giganteum | chr3 | 6 | CH_sgi_449 | 6 | 7 | 0.000000000000404506 |
| Sequoiadendron giganteum | chr3 | 6 | CH_sgi_970 | 5 | 11 | 0.0000000266164 |
| Sapria himalayana | scaffold16_12220143 | 6 | CH_shi_210 | 3 | 4 | 0.00000235376 |
| Solanum lycopersicum | SL4.0ch06 | 6 | CH_sly_208 | 4 | 4 | 0.00000000185636 |
| Solanum tuberosum | ST4.03ch03 | 6 | CH_stu_285 | 4 | 7 | 0.0000000141357 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 6 | CH_tpr_388 | 3 | 4 | 0.0000125106 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_566 | 6 | CH_tpr_389 | 3 | 4 | 0.0000125106 |
| Utricularia gibba | unitig_899 | 6 | CH_ugi_80 | 3 | 3 | 0.00000288809 |
| Vaccinium macrocarpon | chr3_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_12 | 9 | 12 | 1.60137e-22 |
| Vitis vinifera | chr16 | 6 | CH_vvi_190 | 4 | 4 | 0.00000000132168 |
| Zea mays | 10 | 6 | CH_zma_280 | 3 | 3 | 0.0000128475 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |