Functional clusters

Information

  • Type InterPro
  • Description DNA2/NAM7-like helicase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr11 5 CH_acertr_33 7 8 2.67644e-17
Acer truncatum chr11 5 CH_acertr_936 3 7 0.000526866
Actinidia chinensis Lachesis_group20 5 CH_ach_195 3 3 0.0000042891
Arabidopsis lyrata scaffold_7 5 CH_aly_117 5 10 0.000000000107579
Aquilegia oxysepala CHR03 5 CH_aox_24 6 6 0.00000000000000138634
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 5 CH_arhy_114 7 7 2.42298e-19
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.07 5 CH_arhy_392 4 4 0.00000000329427
Arabidopsis thaliana Chr5 5 CH_ath_233 5 64 0.000000236195
Brassica carinata ChrC02 5 CH_bca_421 4 6 0.0000000138245
Camellia sinensis var. sinensis Chr6 5 CH_camsi_1134 3 6 0.000184271
Cannabis sativa NC_044373.1 5 CH_cansat_106 6 36 0.0000000000912274
Cicer arietinum L. Ca_LG6_v3 5 CH_car_115 3 3 0.0000014993
Corylus avellana 11 5 CH_cav_240 4 8 0.00000017199
Corylus avellana 5 5 CH_cav_584 3 7 0.000172541
Chara braunii BFEA01000054 5 CH_cbr_146 3 5 0.0000221815
Citrus clementina scaffold_4 5 CH_ccl_137 5 5 0.000000000002102
Ceratophyllum demersum 9 5 CH_cde_183 3 5 0.00006357
Carpinus fangiana Cfa03 5 CH_cfa_164 4 4 0.00000000310192
Carica papaya supercontig_108 5 CH_cpa_54 5 8 0.000000000149668
Chenopodium quinoa C_Quinoa_Scaffold_2933 5 CH_cqu_269 4 5 0.0000000169497
Capsella rubella scaffold_7 5 CH_cru_426 3 6 0.0000583198
Daucus carota DCARv2_Chr9 5 CH_dca_104 5 8 0.000000000107618
Davidia involucrata GWHABJS00000012 5 CH_din_9 10 10 4.53915e-29
Erigeron canadensis Conyza_canadensis_scaffold:6 5 CH_eca_178 4 5 0.00000000246616
Eucalyptus grandis Chr06 5 CH_egr_268 6 6 0.00000000000000208037
Erythranthe guttata scaffold_8 5 CH_egut_226 4 5 0.00000000790265
Helianthus annuus HanXRQChr14 5 CH_han_78 7 8 1.86275e-18
Lotus japonicus Contig00141 5 CH_lja_32 6 6 5.20815e-16
Lactuca sativa Lsat_1_v8_lg_2 5 CH_lsa_663 3 8 0.000150694
Magnolia biondii Chr03 5 CH_mbi_1068 3 12 0.000434869
Malus domestica Chr08 5 CH_mdo_99 6 7 0.0000000000000058656
Manihot esculenta Chromosome07 5 CH_mes_386 3 3 0.00000254492
Medicago truncatula chr5 5 CH_mtr_146 7 16 2.1797e-16
Nicotiana tabacum Nitab4.5_0001374 5 CH_nta_144 3 3 0.0000101142
Nicotiana tabacum Nitab4.5_0000181 5 CH_nta_145 3 3 0.0000101142
Nicotiana tabacum Nitab4.5_0000091 5 CH_nta_57 4 4 0.00000000721454
Oryza sativa ssp. japonica chr04 5 CH_osa_175 4 4 0.00000000105181
Petunia axillaris Peaxi162Scf00521 5 CH_pax_359 3 4 0.0000242252
Prunus persica Pp01 5 CH_ppe_257 4 4 0.00000000226669
Pisum sativum chr4LG4 5 CH_psa_113 5 8 0.000000000204291
Populus trichocarpa Chr04 5 CH_ptr_119 6 9 0.000000000000122953
Populus trichocarpa Chr17 5 CH_ptr_142 5 5 0.00000000000281724
Quercus lobata 4 5 CH_qlo_253 7 10 2.11676e-16
Rosa chinensis RcHm_v2.0_Chr4 5 CH_rch_1012 3 4 0.0000428438
Rosa chinensis RcHm_v2.0_Chr3 5 CH_rch_109 10 46 3.21423e-19
Salix brachista GWHAAZH00000004 5 CH_sbr_221 4 6 0.0000000267811
Simmondsia chinensis GWHAASQ00000012 5 CH_sci_486 3 12 0.000681989
Simmondsia chinensis GWHAASQ00000013 5 CH_sci_79 4 4 0.00000000132411
Sequoiadendron giganteum chr3 5 CH_sgi_1023 4 4 0.0000000566011
Sequoiadendron giganteum chr9 5 CH_sgi_1156 4 5 0.000000282767
Sequoiadendron giganteum chr1 5 CH_sgi_180 12 47 1.69846e-21
Sequoiadendron giganteum chr3 5 CH_sgi_449 6 7 0.000000000000404506
Sequoiadendron giganteum chr3 5 CH_sgi_970 5 11 0.0000000266164
Sapria himalayana scaffold16_12220143 5 CH_shi_210 3 4 0.00000235376
Solanum lycopersicum SL4.0ch06 5 CH_sly_208 4 4 0.00000000185636
Solanum tuberosum ST4.03ch03 5 CH_stu_285 4 7 0.0000000141357
Trifolium pratense Tp57577_TGAC_v2_LG2 5 CH_tpr_388 3 4 0.0000125106
Trifolium pratense Tp57577_TGAC_v2_scaf_566 5 CH_tpr_389 3 4 0.0000125106
Utricularia gibba unitig_899 5 CH_ugi_80 3 3 0.00000288809
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_12 9 12 1.60137e-22
Vitis vinifera chr16 5 CH_vvi_190 4 4 0.00000000132168
Zea mays 10 5 CH_zma_280 3 3 0.0000128475
Acer truncatum chr11 6 CH_acertr_33 7 8 2.67644e-17
Acer truncatum chr11 6 CH_acertr_936 3 7 0.000526866
Actinidia chinensis Lachesis_group20 6 CH_ach_195 3 3 0.0000042891
Arabidopsis lyrata scaffold_7 6 CH_aly_117 5 10 0.000000000107579
Aquilegia oxysepala CHR03 6 CH_aox_24 6 6 0.00000000000000138634
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 6 CH_arhy_114 7 7 2.42298e-19
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.07 6 CH_arhy_392 4 4 0.00000000329427
Arabidopsis thaliana Chr5 6 CH_ath_233 5 64 0.000000236195
Brassica carinata ChrC02 6 CH_bca_421 4 6 0.0000000138245
Camellia sinensis var. sinensis Chr6 6 CH_camsi_1134 3 6 0.000184271
Cannabis sativa NC_044373.1 6 CH_cansat_106 6 36 0.0000000000912274
Cicer arietinum L. Ca_LG6_v3 6 CH_car_115 3 3 0.0000014993
Corylus avellana 11 6 CH_cav_240 4 8 0.00000017199
Corylus avellana 5 6 CH_cav_584 3 7 0.000172541
Chara braunii BFEA01000054 6 CH_cbr_146 3 5 0.0000221815
Citrus clementina scaffold_4 6 CH_ccl_137 5 5 0.000000000002102
Ceratophyllum demersum 9 6 CH_cde_183 3 5 0.00006357
Carpinus fangiana Cfa03 6 CH_cfa_164 4 4 0.00000000310192
Carica papaya supercontig_108 6 CH_cpa_54 5 8 0.000000000149668
Chenopodium quinoa C_Quinoa_Scaffold_2933 6 CH_cqu_269 4 5 0.0000000169497
Capsella rubella scaffold_7 6 CH_cru_426 3 6 0.0000583198
Daucus carota DCARv2_Chr9 6 CH_dca_104 5 8 0.000000000107618
Davidia involucrata GWHABJS00000012 6 CH_din_9 10 10 4.53915e-29
Erigeron canadensis Conyza_canadensis_scaffold:6 6 CH_eca_178 4 5 0.00000000246616
Eucalyptus grandis Chr06 6 CH_egr_268 6 6 0.00000000000000208037
Erythranthe guttata scaffold_8 6 CH_egut_226 4 5 0.00000000790265
Helianthus annuus HanXRQChr14 6 CH_han_78 7 8 1.86275e-18
Lotus japonicus Contig00141 6 CH_lja_32 6 6 5.20815e-16
Lactuca sativa Lsat_1_v8_lg_2 6 CH_lsa_663 3 8 0.000150694
Magnolia biondii Chr03 6 CH_mbi_1068 3 12 0.000434869
Malus domestica Chr08 6 CH_mdo_99 6 7 0.0000000000000058656
Manihot esculenta Chromosome07 6 CH_mes_386 3 3 0.00000254492
Medicago truncatula chr5 6 CH_mtr_146 7 16 2.1797e-16
Nicotiana tabacum Nitab4.5_0001374 6 CH_nta_144 3 3 0.0000101142
Nicotiana tabacum Nitab4.5_0000181 6 CH_nta_145 3 3 0.0000101142
Nicotiana tabacum Nitab4.5_0000091 6 CH_nta_57 4 4 0.00000000721454
Oryza sativa ssp. japonica chr04 6 CH_osa_175 4 4 0.00000000105181
Petunia axillaris Peaxi162Scf00521 6 CH_pax_359 3 4 0.0000242252
Prunus persica Pp01 6 CH_ppe_257 4 4 0.00000000226669
Pisum sativum chr4LG4 6 CH_psa_113 5 8 0.000000000204291
Populus trichocarpa Chr04 6 CH_ptr_119 6 9 0.000000000000122953
Populus trichocarpa Chr17 6 CH_ptr_142 5 5 0.00000000000281724
Quercus lobata 4 6 CH_qlo_253 7 10 2.11676e-16
Rosa chinensis RcHm_v2.0_Chr4 6 CH_rch_1012 3 4 0.0000428438
Rosa chinensis RcHm_v2.0_Chr3 6 CH_rch_109 10 46 3.21423e-19
Salix brachista GWHAAZH00000004 6 CH_sbr_221 4 6 0.0000000267811
Simmondsia chinensis GWHAASQ00000012 6 CH_sci_486 3 12 0.000681989
Simmondsia chinensis GWHAASQ00000013 6 CH_sci_79 4 4 0.00000000132411
Sequoiadendron giganteum chr3 6 CH_sgi_1023 4 4 0.0000000566011
Sequoiadendron giganteum chr9 6 CH_sgi_1156 4 5 0.000000282767
Sequoiadendron giganteum chr1 6 CH_sgi_180 12 47 1.69846e-21
Sequoiadendron giganteum chr3 6 CH_sgi_449 6 7 0.000000000000404506
Sequoiadendron giganteum chr3 6 CH_sgi_970 5 11 0.0000000266164
Sapria himalayana scaffold16_12220143 6 CH_shi_210 3 4 0.00000235376
Solanum lycopersicum SL4.0ch06 6 CH_sly_208 4 4 0.00000000185636
Solanum tuberosum ST4.03ch03 6 CH_stu_285 4 7 0.0000000141357
Trifolium pratense Tp57577_TGAC_v2_LG2 6 CH_tpr_388 3 4 0.0000125106
Trifolium pratense Tp57577_TGAC_v2_scaf_566 6 CH_tpr_389 3 4 0.0000125106
Utricularia gibba unitig_899 6 CH_ugi_80 3 3 0.00000288809
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_12 9 12 1.60137e-22
Vitis vinifera chr16 6 CH_vvi_190 4 4 0.00000000132168
Zea mays 10 6 CH_zma_280 3 3 0.0000128475

Available child term results

Ontology identifier Description Number of clusters
IPR026122 Helicase MOV-10 4
IPR026300 CWF11 family 14

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001