Functional clusters
Information
- Type InterPro
- Description Mannan endo-1,4-beta-mannosidase-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR05 | 5 | CH_aox_99 | 4 | 5 | 0.0000000055311 |
| Arabidopsis thaliana | Chr3 | 5 | CH_ath_645 | 2 | 2 | 0.000802177 |
| Amborella trichopoda | AmTr_v1.0_scaffold00003 | 5 | CH_atr_355 | 4 | 40 | 0.0000673299 |
| Camellia sinensis var. sinensis | Chr9 | 5 | CH_camsi_1561 | 2 | 2 | 0.000962949 |
| Capsicum annuum | PGAv.1.6.scaffold14 | 5 | CH_can_191 | 4 | 4 | 0.000000000837309 |
| Corchorus olitorius | AWUE01017846.1 | 5 | CH_col_233 | 2 | 2 | 0.000876296 |
| Capsella rubella | scaffold_3 | 5 | CH_cru_280 | 3 | 3 | 0.000000449069 |
| Daucus carota | DCARv2_Chr4 | 5 | CH_dca_294 | 3 | 3 | 0.00000277621 |
| Davidia involucrata | GWHABJS00000015 | 5 | CH_din_277 | 3 | 3 | 0.000000315165 |
| Eucalyptus grandis | Chr11 | 5 | CH_egr_811 | 3 | 3 | 0.000000847827 |
| Erythranthe guttata | scaffold_11 | 5 | CH_egut_331 | 4 | 18 | 0.000000742132 |
| Helianthus annuus | HanXRQChr02 | 5 | CH_han_691 | 3 | 5 | 0.0000101878 |
| Lupinus albus | Lalb_Chr16 | 5 | CH_lal_110 | 4 | 4 | 0.000000000592011 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 5 | CH_lsa_203 | 4 | 5 | 0.000000000256653 |
| Magnolia biondii | Chr06 | 5 | CH_mbi_160 | 5 | 8 | 0.00000000000701302 |
| Magnolia biondii | Chr15 | 5 | CH_mbi_797 | 3 | 7 | 0.0000562893 |
| Marchantia polymorpha | scaffold_110 | 5 | CH_mpo_229 | 2 | 3 | 0.000993889 |
| Medicago truncatula | chr1 | 5 | CH_mtr_312 | 5 | 11 | 0.0000000000610249 |
| Petunia axillaris | Peaxi162Scf00276 | 5 | CH_pax_368 | 3 | 5 | 0.0000337606 |
| Punica granatum | NC_045130.1 | 5 | CH_pgr_339 | 3 | 5 | 0.00000709158 |
| Pisum sativum | chr6LG2 | 5 | CH_psa_212 | 3 | 4 | 0.0000000653034 |
| Striga asiatica | scaffold118 | 5 | CH_sas_89 | 3 | 5 | 0.00000492618 |
| Salvia bowleyana | GWHASIU00000001 | 5 | CH_sbo_330 | 4 | 18 | 0.000000427002 |
| Salix brachista | GWHAAZH00000013 | 5 | CH_sbr_617 | 3 | 16 | 0.000399241 |
| Simmondsia chinensis | GWHAASQ00000014 | 5 | CH_sci_203 | 3 | 5 | 0.00000380473 |
| Sequoiadendron giganteum | chr6 | 5 | CH_sgi_1254 | 3 | 3 | 0.000000783163 |
| Solanum lycopersicum | SL4.0ch06 | 5 | CH_sly_543 | 3 | 5 | 0.0000351162 |
| Solanum lycopersicum | SL4.0ch12 | 5 | CH_sly_839 | 3 | 10 | 0.000420684 |
| Solanum pennellii | Spenn-ch06 | 5 | CH_spe_404 | 3 | 4 | 0.00000339434 |
| Solanum tuberosum | ST4.03ch12 | 5 | CH_stu_110 | 7 | 22 | 0.00000000000000471436 |
| Tripterygium wilfordii | NC_052248.1 | 5 | CH_twi_101 | 4 | 5 | 0.000000000327483 |
| Vitis vinifera | chr18 | 5 | CH_vvi_81 | 6 | 6 | 9.83403e-17 |
| Aquilegia oxysepala | CHR05 | 6 | CH_aox_99 | 4 | 5 | 0.0000000055311 |
| Arabidopsis thaliana | Chr3 | 6 | CH_ath_645 | 2 | 2 | 0.000802177 |
| Amborella trichopoda | AmTr_v1.0_scaffold00003 | 6 | CH_atr_355 | 4 | 40 | 0.0000673299 |
| Camellia sinensis var. sinensis | Chr9 | 6 | CH_camsi_1561 | 2 | 2 | 0.000962949 |
| Capsicum annuum | PGAv.1.6.scaffold14 | 6 | CH_can_191 | 4 | 4 | 0.000000000837309 |
| Corchorus olitorius | AWUE01017846.1 | 6 | CH_col_233 | 2 | 2 | 0.000876296 |
| Capsella rubella | scaffold_3 | 6 | CH_cru_280 | 3 | 3 | 0.000000449069 |
| Daucus carota | DCARv2_Chr4 | 6 | CH_dca_294 | 3 | 3 | 0.00000277621 |
| Davidia involucrata | GWHABJS00000015 | 6 | CH_din_277 | 3 | 3 | 0.000000315165 |
| Eucalyptus grandis | Chr11 | 6 | CH_egr_811 | 3 | 3 | 0.000000847827 |
| Erythranthe guttata | scaffold_11 | 6 | CH_egut_331 | 4 | 18 | 0.000000742132 |
| Helianthus annuus | HanXRQChr02 | 6 | CH_han_691 | 3 | 5 | 0.0000101878 |
| Lupinus albus | Lalb_Chr16 | 6 | CH_lal_110 | 4 | 4 | 0.000000000592011 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 6 | CH_lsa_203 | 4 | 5 | 0.000000000256653 |
| Magnolia biondii | Chr06 | 6 | CH_mbi_160 | 5 | 8 | 0.00000000000701302 |
| Magnolia biondii | Chr15 | 6 | CH_mbi_797 | 3 | 7 | 0.0000562893 |
| Marchantia polymorpha | scaffold_110 | 6 | CH_mpo_229 | 2 | 3 | 0.000993889 |
| Medicago truncatula | chr1 | 6 | CH_mtr_312 | 5 | 11 | 0.0000000000610249 |
| Petunia axillaris | Peaxi162Scf00276 | 6 | CH_pax_368 | 3 | 5 | 0.0000337606 |
| Punica granatum | NC_045130.1 | 6 | CH_pgr_339 | 3 | 5 | 0.00000709158 |
| Pisum sativum | chr6LG2 | 6 | CH_psa_212 | 3 | 4 | 0.0000000653034 |
| Striga asiatica | scaffold118 | 6 | CH_sas_89 | 3 | 5 | 0.00000492618 |
| Salvia bowleyana | GWHASIU00000001 | 6 | CH_sbo_330 | 4 | 18 | 0.000000427002 |
| Salix brachista | GWHAAZH00000013 | 6 | CH_sbr_617 | 3 | 16 | 0.000399241 |
| Simmondsia chinensis | GWHAASQ00000014 | 6 | CH_sci_203 | 3 | 5 | 0.00000380473 |
| Sequoiadendron giganteum | chr6 | 6 | CH_sgi_1254 | 3 | 3 | 0.000000783163 |
| Solanum lycopersicum | SL4.0ch06 | 6 | CH_sly_543 | 3 | 5 | 0.0000351162 |
| Solanum lycopersicum | SL4.0ch12 | 6 | CH_sly_839 | 3 | 10 | 0.000420684 |
| Solanum pennellii | Spenn-ch06 | 6 | CH_spe_404 | 3 | 4 | 0.00000339434 |
| Solanum tuberosum | ST4.03ch12 | 6 | CH_stu_110 | 7 | 22 | 0.00000000000000471436 |
| Tripterygium wilfordii | NC_052248.1 | 6 | CH_twi_101 | 4 | 5 | 0.000000000327483 |
| Vitis vinifera | chr18 | 6 | CH_vvi_81 | 6 | 6 | 9.83403e-17 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |