Functional clusters
Information
- Type InterPro
- Description O-acyltransferase WSD1-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-1 | 5 | CH_aar_115 | 4 | 4 | 0.00000000697191 |
| Aethionema arabicum | LG-4 | 5 | CH_aar_34 | 7 | 7 | 1.44611e-18 |
| Arabidopsis lyrata | scaffold_6 | 5 | CH_aly_327 | 3 | 3 | 0.00000237877 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_1 | 5 | CH_amhyb_180 | 3 | 5 | 0.0000127476 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.16 | 5 | CH_arhy_711 | 3 | 3 | 0.00000491271 |
| Amborella trichopoda | AmTr_v1.0_scaffold00007 | 5 | CH_atr_523 | 2 | 2 | 0.000238322 |
| Brassica carinata | ChrB08 | 5 | CH_bca_367 | 4 | 4 | 0.00000000522697 |
| Brassica napus | C09 | 5 | CH_bna_941 | 3 | 4 | 0.0000335096 |
| Beta vulgaris | Chr3_EL10_PGA_scaffold7 | 5 | CH_bvu_120 | 4 | 4 | 0.0000000030989 |
| Coffea canephora | chr5 | 5 | CH_ccan_194 | 3 | 12 | 0.000000335166 |
| Carica papaya | supercontig_3 | 5 | CH_cpa_225 | 3 | 6 | 0.00000542028 |
| Cucumis sativus L. | chr7 | 5 | CH_csa_23 | 7 | 7 | 2.66619e-23 |
| Davidia involucrata | GWHABJS00000013 | 5 | CH_din_86 | 6 | 16 | 0.0000000000000965973 |
| Eucalyptus grandis | Chr08 | 5 | CH_egr_245 | 6 | 9 | 2.72544e-16 |
| Erythranthe guttata | scaffold_13 | 5 | CH_egut_102 | 6 | 9 | 0.00000000000000663589 |
| Glycine max | Gm12 | 5 | CH_gma_470 | 3 | 5 | 0.00000617845 |
| Helianthus annuus | HanXRQChr12 | 5 | CH_han_268 | 4 | 4 | 0.000000000315084 |
| Lupinus albus | Lalb_Chr22 | 5 | CH_lal_97 | 4 | 4 | 0.0000000000910786 |
| Lonicera japonica | GWHAAZE00000003 | 5 | CH_lonja_224 | 5 | 5 | 0.00000000000196347 |
| Lonicera japonica | GWHAAZE00000009 | 5 | CH_lonja_544 | 4 | 11 | 0.00000126887 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 5 | CH_lsa_46 | 9 | 22 | 1.66649e-21 |
| Magnolia biondii | Chr02 | 5 | CH_mbi_200 | 4 | 4 | 0.0000000000721725 |
| Malus domestica | Chr17 | 5 | CH_mdo_111 | 6 | 12 | 0.0000000000000201563 |
| Malus domestica | Chr10 | 5 | CH_mdo_333 | 4 | 6 | 0.0000000058381 |
| Malus domestica | Chr05 | 5 | CH_mdo_809 | 3 | 6 | 0.0000293169 |
| Petunia axillaris | Peaxi162Scf00023 | 5 | CH_pax_173 | 4 | 7 | 0.0000000498672 |
| Prunus persica | Pp08 | 5 | CH_ppe_189 | 5 | 7 | 0.0000000000417582 |
| Prunus persica | Pp07 | 5 | CH_ppe_540 | 3 | 4 | 0.0000272328 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 5 | CH_rch_1075 | 3 | 12 | 0.000115221 |
| Salix brachista | GWHAAZH00000016 | 5 | CH_sbr_373 | 3 | 3 | 0.00000792191 |
| Salix brachista | GWHAAZH00000007 | 5 | CH_sbr_393 | 5 | 60 | 0.0000128219 |
| Salix brachista | GWHAAZH00000019 | 5 | CH_sbr_67 | 6 | 6 | 0.00000000000000121343 |
| Simmondsia chinensis | GWHAASQ00000015 | 5 | CH_sci_170 | 3 | 4 | 0.000000869828 |
| Sequoiadendron giganteum | chr2 | 5 | CH_sgi_1145 | 4 | 6 | 0.000000240991 |
| Sequoiadendron giganteum | chr10 | 5 | CH_sgi_528 | 6 | 11 | 0.00000000000382488 |
| Sequoiadendron giganteum | chr9 | 5 | CH_sgi_749 | 6 | 27 | 0.00000000242688 |
| Solanum pennellii | Spenn-ch01 | 5 | CH_spe_317 | 3 | 3 | 0.000000249282 |
| Solanum tuberosum | ST4.03ch01 | 5 | CH_stu_131 | 5 | 5 | 0.0000000000000665766 |
| Trochodendron aralioides | group4 | 5 | CH_tar_369 | 3 | 3 | 0.00000196806 |
| Trochodendron aralioides | group9 | 5 | CH_tar_52 | 6 | 9 | 0.00000000000000442508 |
| Theobroma cacao | Chromosome_8 | 5 | CH_tca_334 | 3 | 3 | 0.000000281615 |
| Utricularia gibba | unitig_748 | 5 | CH_ugi_13 | 6 | 8 | 0.000000000000314994 |
| Utricularia gibba | unitig_37 | 5 | CH_ugi_19 | 5 | 6 | 0.0000000000866402 |
| Utricularia gibba | unitig_37 | 5 | CH_ugi_98 | 3 | 3 | 0.0000204388 |
| Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_69 | 7 | 33 | 0.000000000000736299 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_84 | 5 | 6 | 0.00000000000671637 |
| Vitis vinifera | chr15 | 5 | CH_vvi_5 | 15 | 16 | 2.26859e-46 |
| Aethionema arabicum | LG-1 | 6 | CH_aar_115 | 4 | 4 | 0.00000000697191 |
| Aethionema arabicum | LG-4 | 6 | CH_aar_34 | 7 | 7 | 1.44611e-18 |
| Arabidopsis lyrata | scaffold_6 | 6 | CH_aly_327 | 3 | 3 | 0.00000237877 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_1 | 6 | CH_amhyb_180 | 3 | 5 | 0.0000127476 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.16 | 6 | CH_arhy_711 | 3 | 3 | 0.00000491271 |
| Amborella trichopoda | AmTr_v1.0_scaffold00007 | 6 | CH_atr_523 | 2 | 2 | 0.000238322 |
| Brassica carinata | ChrB08 | 6 | CH_bca_367 | 4 | 4 | 0.00000000522697 |
| Brassica napus | C09 | 6 | CH_bna_941 | 3 | 4 | 0.0000335096 |
| Beta vulgaris | Chr3_EL10_PGA_scaffold7 | 6 | CH_bvu_120 | 4 | 4 | 0.0000000030989 |
| Coffea canephora | chr5 | 6 | CH_ccan_194 | 3 | 12 | 0.000000335166 |
| Carica papaya | supercontig_3 | 6 | CH_cpa_225 | 3 | 6 | 0.00000542028 |
| Cucumis sativus L. | chr7 | 6 | CH_csa_23 | 7 | 7 | 2.66619e-23 |
| Davidia involucrata | GWHABJS00000013 | 6 | CH_din_86 | 6 | 16 | 0.0000000000000965973 |
| Eucalyptus grandis | Chr08 | 6 | CH_egr_245 | 6 | 9 | 2.72544e-16 |
| Erythranthe guttata | scaffold_13 | 6 | CH_egut_102 | 6 | 9 | 0.00000000000000663589 |
| Glycine max | Gm12 | 6 | CH_gma_470 | 3 | 5 | 0.00000617845 |
| Helianthus annuus | HanXRQChr12 | 6 | CH_han_268 | 4 | 4 | 0.000000000315084 |
| Lupinus albus | Lalb_Chr22 | 6 | CH_lal_97 | 4 | 4 | 0.0000000000910786 |
| Lonicera japonica | GWHAAZE00000003 | 6 | CH_lonja_224 | 5 | 5 | 0.00000000000196347 |
| Lonicera japonica | GWHAAZE00000009 | 6 | CH_lonja_544 | 4 | 11 | 0.00000126887 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 6 | CH_lsa_46 | 9 | 22 | 1.66649e-21 |
| Magnolia biondii | Chr02 | 6 | CH_mbi_200 | 4 | 4 | 0.0000000000721725 |
| Malus domestica | Chr17 | 6 | CH_mdo_111 | 6 | 12 | 0.0000000000000201563 |
| Malus domestica | Chr10 | 6 | CH_mdo_333 | 4 | 6 | 0.0000000058381 |
| Malus domestica | Chr05 | 6 | CH_mdo_809 | 3 | 6 | 0.0000293169 |
| Petunia axillaris | Peaxi162Scf00023 | 6 | CH_pax_173 | 4 | 7 | 0.0000000498672 |
| Prunus persica | Pp08 | 6 | CH_ppe_189 | 5 | 7 | 0.0000000000417582 |
| Prunus persica | Pp07 | 6 | CH_ppe_540 | 3 | 4 | 0.0000272328 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 6 | CH_rch_1075 | 3 | 12 | 0.000115221 |
| Salix brachista | GWHAAZH00000016 | 6 | CH_sbr_373 | 3 | 3 | 0.00000792191 |
| Salix brachista | GWHAAZH00000007 | 6 | CH_sbr_393 | 5 | 60 | 0.0000128219 |
| Salix brachista | GWHAAZH00000019 | 6 | CH_sbr_67 | 6 | 6 | 0.00000000000000121343 |
| Simmondsia chinensis | GWHAASQ00000015 | 6 | CH_sci_170 | 3 | 4 | 0.000000869828 |
| Sequoiadendron giganteum | chr2 | 6 | CH_sgi_1145 | 4 | 6 | 0.000000240991 |
| Sequoiadendron giganteum | chr10 | 6 | CH_sgi_528 | 6 | 11 | 0.00000000000382488 |
| Sequoiadendron giganteum | chr9 | 6 | CH_sgi_749 | 6 | 27 | 0.00000000242688 |
| Solanum pennellii | Spenn-ch01 | 6 | CH_spe_317 | 3 | 3 | 0.000000249282 |
| Solanum tuberosum | ST4.03ch01 | 6 | CH_stu_131 | 5 | 5 | 0.0000000000000665766 |
| Trochodendron aralioides | group4 | 6 | CH_tar_369 | 3 | 3 | 0.00000196806 |
| Trochodendron aralioides | group9 | 6 | CH_tar_52 | 6 | 9 | 0.00000000000000442508 |
| Theobroma cacao | Chromosome_8 | 6 | CH_tca_334 | 3 | 3 | 0.000000281615 |
| Utricularia gibba | unitig_748 | 6 | CH_ugi_13 | 6 | 8 | 0.000000000000314994 |
| Utricularia gibba | unitig_37 | 6 | CH_ugi_19 | 5 | 6 | 0.0000000000866402 |
| Utricularia gibba | unitig_37 | 6 | CH_ugi_98 | 3 | 3 | 0.0000204388 |
| Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_69 | 7 | 33 | 0.000000000000736299 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_84 | 5 | 6 | 0.00000000000671637 |
| Vitis vinifera | chr15 | 6 | CH_vvi_5 | 15 | 16 | 2.26859e-46 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |