Functional clusters
Information
- Type InterPro
- Description Pectin lyase family
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr9 | 5 | CH_acertr_438 | 3 | 3 | 0.0000072239 |
| Gossypium hirsutum | D12 | 5 | CH_ghi_921 | 3 | 3 | 0.000134305 |
| Punica granatum | NC_045134.1 | 5 | CH_pgr_345 | 3 | 3 | 0.00000962826 |
| Quercus lobata | 7 | 5 | CH_qlo_898 | 4 | 9 | 0.000000551595 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_609 | 5 | CH_tpr_641 | 3 | 5 | 0.000251056 |
| Vanilla planifolia | CM028153.1 | 5 | CH_vpl_248 | 5 | 52 | 0.00000487754 |
| Acer truncatum | chr9 | 6 | CH_acertr_438 | 3 | 3 | 0.0000072239 |
| Gossypium hirsutum | D12 | 6 | CH_ghi_921 | 3 | 3 | 0.000134305 |
| Punica granatum | NC_045134.1 | 6 | CH_pgr_345 | 3 | 3 | 0.00000962826 |
| Quercus lobata | 7 | 6 | CH_qlo_898 | 4 | 9 | 0.000000551595 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_609 | 6 | CH_tpr_641 | 3 | 5 | 0.000251056 |
| Vanilla planifolia | CM028153.1 | 6 | CH_vpl_248 | 5 | 52 | 0.00000487754 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |