Functional clusters
Information
- Type InterPro
- Description AmbAllergen
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_228 | 5 | CH_aag_95 | 4 | 10 | 0.000000107315 |
| Brassica carinata | ChrC04 | 5 | CH_bca_1338 | 3 | 3 | 0.0000677004 |
| Brassica carinata | ChrB02 | 5 | CH_bca_732 | 4 | 6 | 0.000000888791 |
| Citrus clementina | scaffold_6 | 5 | CH_ccl_289 | 4 | 6 | 0.000000075943 |
| Gossypium hirsutum | D05 | 5 | CH_ghi_103 | 8 | 8 | 2.59144e-19 |
| Glycine max | Gm18 | 5 | CH_gma_511 | 3 | 3 | 0.0000154295 |
| Gossypium raimondii | Chr10 | 5 | CH_gra_33 | 10 | 10 | 9.24081e-25 |
| Gossypium raimondii | Chr09 | 5 | CH_gra_81 | 7 | 7 | 4.33777e-16 |
| Helianthus annuus | HanXRQChr17 | 5 | CH_han_756 | 3 | 3 | 0.0000238779 |
| Hydrangea macrophylla | Hma1.2p1_0145F.1 | 5 | CH_hma_131 | 4 | 8 | 0.0000000948749 |
| Lonicera japonica | GWHAAZE00000007 | 5 | CH_lonja_380 | 4 | 4 | 0.0000000176602 |
| Manihot esculenta | Chromosome05 | 5 | CH_mes_311 | 4 | 6 | 0.00000024306 |
| Medicago truncatula | chr8 | 5 | CH_mtr_740 | 4 | 10 | 0.00000228075 |
| Medicago truncatula | chr5 | 5 | CH_mtr_765 | 4 | 11 | 0.00000358213 |
| Pisum sativum | chr2LG1 | 5 | CH_psa_235 | 4 | 6 | 0.000000130651 |
| Papaver somniferum | NC_039368.1 | 5 | CH_pso_739 | 3 | 5 | 0.000013479 |
| Salix brachista | GWHAAZH00000014 | 5 | CH_sbr_421 | 4 | 22 | 0.0000263986 |
| Simmondsia chinensis | GWHAASQ00000014 | 5 | CH_sci_228 | 3 | 3 | 0.0000144629 |
| Sequoiadendron giganteum | chr7 | 5 | CH_sgi_1266 | 4 | 5 | 0.000000904006 |
| Sequoiadendron giganteum | chr3 | 5 | CH_sgi_4 | 22 | 22 | 3.29196e-60 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 5 | CH_tpr_723 | 4 | 31 | 0.000508659 |
| Anthoceros agrestis | Sc2ySwM_228 | 6 | CH_aag_95 | 4 | 10 | 0.000000107315 |
| Brassica carinata | ChrC04 | 6 | CH_bca_1338 | 3 | 3 | 0.0000677004 |
| Brassica carinata | ChrB02 | 6 | CH_bca_732 | 4 | 6 | 0.000000888791 |
| Citrus clementina | scaffold_6 | 6 | CH_ccl_289 | 4 | 6 | 0.000000075943 |
| Gossypium hirsutum | D05 | 6 | CH_ghi_103 | 8 | 8 | 2.59144e-19 |
| Glycine max | Gm18 | 6 | CH_gma_511 | 3 | 3 | 0.0000154295 |
| Gossypium raimondii | Chr10 | 6 | CH_gra_33 | 10 | 10 | 9.24081e-25 |
| Gossypium raimondii | Chr09 | 6 | CH_gra_81 | 7 | 7 | 4.33777e-16 |
| Helianthus annuus | HanXRQChr17 | 6 | CH_han_756 | 3 | 3 | 0.0000238779 |
| Hydrangea macrophylla | Hma1.2p1_0145F.1 | 6 | CH_hma_131 | 4 | 8 | 0.0000000948749 |
| Lonicera japonica | GWHAAZE00000007 | 6 | CH_lonja_380 | 4 | 4 | 0.0000000176602 |
| Manihot esculenta | Chromosome05 | 6 | CH_mes_311 | 4 | 6 | 0.00000024306 |
| Medicago truncatula | chr8 | 6 | CH_mtr_740 | 4 | 10 | 0.00000228075 |
| Medicago truncatula | chr5 | 6 | CH_mtr_765 | 4 | 11 | 0.00000358213 |
| Pisum sativum | chr2LG1 | 6 | CH_psa_235 | 4 | 6 | 0.000000130651 |
| Papaver somniferum | NC_039368.1 | 6 | CH_pso_739 | 3 | 5 | 0.000013479 |
| Salix brachista | GWHAAZH00000014 | 6 | CH_sbr_421 | 4 | 22 | 0.0000263986 |
| Simmondsia chinensis | GWHAASQ00000014 | 6 | CH_sci_228 | 3 | 3 | 0.0000144629 |
| Sequoiadendron giganteum | chr7 | 6 | CH_sgi_1266 | 4 | 5 | 0.000000904006 |
| Sequoiadendron giganteum | chr3 | 6 | CH_sgi_4 | 22 | 22 | 3.29196e-60 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 6 | CH_tpr_723 | 4 | 31 | 0.000508659 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |