Functional clusters
Information
- Type InterPro
- Description PHR1-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_6 | 5 | CH_aly_259 | 4 | 7 | 0.000000450601 |
| Brassica carinata | ChrC06 | 5 | CH_bca_1355 | 3 | 3 | 0.0000778407 |
| Corylus avellana | 10 | 5 | CH_cav_398 | 3 | 3 | 0.0000117275 |
| Helianthus annuus | HanXRQChr08 | 5 | CH_han_728 | 3 | 3 | 0.0000159932 |
| Lupinus albus | Lalb_Chr15 | 5 | CH_lal_449 | 3 | 3 | 0.0000913109 |
| Lupinus albus | Lalb_Chr15 | 5 | CH_lal_450 | 3 | 3 | 0.0000913109 |
| Lupinus albus | Lalb_Chr18 | 5 | CH_lal_451 | 3 | 3 | 0.0000913109 |
| Medicago truncatula | chr1 | 5 | CH_mtr_820 | 3 | 3 | 0.00000925259 |
| Sequoiadendron giganteum | chr9 | 5 | CH_sgi_1516 | 3 | 3 | 0.0000232991 |
| Sequoiadendron giganteum | chr5 | 5 | CH_sgi_1517 | 3 | 3 | 0.0000232991 |
| Solanum lycopersicum | SL4.0ch12 | 5 | CH_sly_521 | 3 | 3 | 0.0000232285 |
| Selaginella moellendorffii | scaffold_3 | 5 | CH_smo_160 | 3 | 4 | 0.0000115042 |
| Selaginella moellendorffii | scaffold_23 | 5 | CH_smo_293 | 3 | 10 | 0.000344379 |
| Arabidopsis lyrata | scaffold_6 | 6 | CH_aly_259 | 4 | 7 | 0.000000450601 |
| Brassica carinata | ChrC06 | 6 | CH_bca_1355 | 3 | 3 | 0.0000778407 |
| Corylus avellana | 10 | 6 | CH_cav_398 | 3 | 3 | 0.0000117275 |
| Helianthus annuus | HanXRQChr08 | 6 | CH_han_728 | 3 | 3 | 0.0000159932 |
| Lupinus albus | Lalb_Chr15 | 6 | CH_lal_449 | 3 | 3 | 0.0000913109 |
| Lupinus albus | Lalb_Chr15 | 6 | CH_lal_450 | 3 | 3 | 0.0000913109 |
| Lupinus albus | Lalb_Chr18 | 6 | CH_lal_451 | 3 | 3 | 0.0000913109 |
| Medicago truncatula | chr1 | 6 | CH_mtr_820 | 3 | 3 | 0.00000925259 |
| Sequoiadendron giganteum | chr9 | 6 | CH_sgi_1516 | 3 | 3 | 0.0000232991 |
| Sequoiadendron giganteum | chr5 | 6 | CH_sgi_1517 | 3 | 3 | 0.0000232991 |
| Solanum lycopersicum | SL4.0ch12 | 6 | CH_sly_521 | 3 | 3 | 0.0000232285 |
| Selaginella moellendorffii | scaffold_3 | 6 | CH_smo_160 | 3 | 4 | 0.0000115042 |
| Selaginella moellendorffii | scaffold_23 | 6 | CH_smo_293 | 3 | 10 | 0.000344379 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |