Functional clusters

Information

  • Type InterPro
  • Description Trans-isoprenyl diphosphate synthases, eukaryotic-type

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica oleracea C3 5 CH_bol_212 3 3 0.0000000320521
Corylus avellana 1 5 CH_cav_250 3 7 0.00000030857
Cardamine hirsuta Chr3 5 CH_chi_587 2 2 0.000207361
Carica papaya supercontig_150 5 CH_cpa_93 3 3 0.000000013557
Erigeron canadensis Conyza_canadensis_scaffold:8 5 CH_eca_678 2 2 0.000269233
Eucalyptus grandis Chr02 5 CH_egr_1167 2 2 0.000175582
Magnolia biondii Chr16 5 CH_mbi_893 2 2 0.000145698
Sequoiadendron giganteum chr7 5 CH_sgi_1581 2 2 0.0000487151
Solanum pennellii Spenn-ch10 5 CH_spe_876 2 3 0.000800581
Solanum tuberosum ST4.03ch10 5 CH_stu_826 2 3 0.000461188
Selenicereus undatus Scaffold_33676 5 CH_sun_26 4 4 0.00000000000575564
Theobroma cacao Chromosome_2 5 CH_tca_517 2 2 0.0000732386
Brassica oleracea C3 6 CH_bol_212 3 3 0.0000000320521
Corylus avellana 1 6 CH_cav_250 3 7 0.00000030857
Cardamine hirsuta Chr3 6 CH_chi_587 2 2 0.000207361
Carica papaya supercontig_150 6 CH_cpa_93 3 3 0.000000013557
Erigeron canadensis Conyza_canadensis_scaffold:8 6 CH_eca_678 2 2 0.000269233
Eucalyptus grandis Chr02 6 CH_egr_1167 2 2 0.000175582
Magnolia biondii Chr16 6 CH_mbi_893 2 2 0.000145698
Sequoiadendron giganteum chr7 6 CH_sgi_1581 2 2 0.0000487151
Solanum pennellii Spenn-ch10 6 CH_spe_876 2 3 0.000800581
Solanum tuberosum ST4.03ch10 6 CH_stu_826 2 3 0.000461188
Selenicereus undatus Scaffold_33676 6 CH_sun_26 4 4 0.00000000000575564
Theobroma cacao Chromosome_2 6 CH_tca_517 2 2 0.0000732386

Available child term results

Ontology identifier Description Number of clusters
IPR006449 Squalene synthase-like 28

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001