Functional clusters
Information
- Type InterPro
- Description Squamosa promoter-binding-like protein
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00106 | 5 | CH_atr_278 | 3 | 3 | 0.00000270745 |
| Camellia sinensis var. sinensis | Chr9 | 5 | CH_camsi_771 | 4 | 13 | 0.00000647756 |
| Ceratophyllum demersum | 8 | 5 | CH_cde_470 | 4 | 25 | 0.00057742 |
| Daucus carota | DCARv2_Chr7 | 5 | CH_dca_341 | 3 | 3 | 0.0000108059 |
| Hydrangea macrophylla | Hma1.2p1_0341F.1 | 5 | CH_hma_242 | 3 | 4 | 0.0000336719 |
| Physcomitrium patens | Chr03 | 5 | CH_ppa_98 | 3 | 4 | 0.00000644096 |
| Vanilla planifolia | CM028152.1 | 5 | CH_vpl_244 | 4 | 9 | 0.00000416238 |
| Vanilla planifolia | CM028150.1 | 5 | CH_vpl_465 | 5 | 56 | 0.000116801 |
| Amborella trichopoda | AmTr_v1.0_scaffold00106 | 6 | CH_atr_278 | 3 | 3 | 0.00000270745 |
| Camellia sinensis var. sinensis | Chr9 | 6 | CH_camsi_771 | 4 | 13 | 0.00000647756 |
| Ceratophyllum demersum | 8 | 6 | CH_cde_470 | 4 | 25 | 0.00057742 |
| Daucus carota | DCARv2_Chr7 | 6 | CH_dca_341 | 3 | 3 | 0.0000108059 |
| Hydrangea macrophylla | Hma1.2p1_0341F.1 | 6 | CH_hma_242 | 3 | 4 | 0.0000336719 |
| Physcomitrium patens | Chr03 | 6 | CH_ppa_98 | 3 | 4 | 0.00000644096 |
| Vanilla planifolia | CM028152.1 | 6 | CH_vpl_244 | 4 | 9 | 0.00000416238 |
| Vanilla planifolia | CM028150.1 | 6 | CH_vpl_465 | 5 | 56 | 0.000116801 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |