Functional clusters
Information
- Type InterPro
- Description B3 domain-containing transcription factor LEC2-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group9 | 5 | CH_ach_6 | 10 | 16 | 1.03434e-23 |
| Actinidia chinensis | Lachesis_group15 | 5 | CH_ach_76 | 4 | 4 | 0.0000000151319 |
| Brassica carinata | ChrC01 | 5 | CH_bca_1243 | 3 | 3 | 0.0000501396 |
| Brassica carinata | ChrC08 | 5 | CH_bca_1534 | 3 | 4 | 0.000200437 |
| Brassica carinata | ChrC06 | 5 | CH_bca_1841 | 3 | 5 | 0.00050079 |
| Camellia sinensis var. sinensis | Chr10 | 5 | CH_camsi_1128 | 3 | 10 | 0.000171935 |
| Cardamine hirsuta | Chr1 | 5 | CH_chi_543 | 3 | 5 | 0.0000816228 |
| Daucus carota | DCARv2_Chr2 | 5 | CH_dca_141 | 4 | 4 | 0.00000000377103 |
| Eutrema salsugineum | scaffold_7 | 5 | CH_esa_151 | 4 | 5 | 0.0000000320785 |
| Malus domestica | Chr09 | 5 | CH_mdo_683 | 3 | 3 | 0.00000496124 |
| Papaver somniferum | NC_039361.1 | 5 | CH_pso_1070 | 3 | 9 | 0.000316729 |
| Rhododendron simsii | chr01 | 5 | CH_rsi_313 | 5 | 12 | 0.00000000436228 |
| Striga asiatica | scaffold36 | 5 | CH_sas_97 | 3 | 5 | 0.00000703708 |
| Sequoiadendron giganteum | chr7 | 5 | CH_sgi_215 | 8 | 11 | 1.05091e-19 |
| Sequoiadendron giganteum | chr7 | 5 | CH_sgi_409 | 6 | 9 | 0.000000000000195119 |
| Sequoiadendron giganteum | chr8 | 5 | CH_sgi_864 | 4 | 4 | 0.0000000071018 |
| Actinidia chinensis | Lachesis_group9 | 6 | CH_ach_6 | 10 | 16 | 1.03434e-23 |
| Actinidia chinensis | Lachesis_group15 | 6 | CH_ach_76 | 4 | 4 | 0.0000000151319 |
| Brassica carinata | ChrC01 | 6 | CH_bca_1243 | 3 | 3 | 0.0000501396 |
| Brassica carinata | ChrC08 | 6 | CH_bca_1534 | 3 | 4 | 0.000200437 |
| Brassica carinata | ChrC06 | 6 | CH_bca_1841 | 3 | 5 | 0.00050079 |
| Camellia sinensis var. sinensis | Chr10 | 6 | CH_camsi_1128 | 3 | 10 | 0.000171935 |
| Cardamine hirsuta | Chr1 | 6 | CH_chi_543 | 3 | 5 | 0.0000816228 |
| Daucus carota | DCARv2_Chr2 | 6 | CH_dca_141 | 4 | 4 | 0.00000000377103 |
| Eutrema salsugineum | scaffold_7 | 6 | CH_esa_151 | 4 | 5 | 0.0000000320785 |
| Malus domestica | Chr09 | 6 | CH_mdo_683 | 3 | 3 | 0.00000496124 |
| Papaver somniferum | NC_039361.1 | 6 | CH_pso_1070 | 3 | 9 | 0.000316729 |
| Rhododendron simsii | chr01 | 6 | CH_rsi_313 | 5 | 12 | 0.00000000436228 |
| Striga asiatica | scaffold36 | 6 | CH_sas_97 | 3 | 5 | 0.00000703708 |
| Sequoiadendron giganteum | chr7 | 6 | CH_sgi_215 | 8 | 11 | 1.05091e-19 |
| Sequoiadendron giganteum | chr7 | 6 | CH_sgi_409 | 6 | 9 | 0.000000000000195119 |
| Sequoiadendron giganteum | chr8 | 6 | CH_sgi_864 | 4 | 4 | 0.0000000071018 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |